RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TAZQ16635 292 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.75□□□□□ -0.05
SRP54-202ENST00000546080 MAP3K21Q5TCX8 1036 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 DARS2Q6PI48 645 aaKnown RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 FAM43BQ6ZT52 329 aaPredicted RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 OR5B17Q8NGF7 314 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 SPATA18Q8TC71 538 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 SYTL5Q8TDW5 730 aaPredicted RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 TAAR1Q96RJ0 339 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 C20orf27Q9GZN8 174 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 HOMER2Q9NSB8 354 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 NDUFA13Q9P0J0 144 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 ADAMTS6Q9UKP5 1117 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 PCDHA10Q9Y5I2 948 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 CXorf49A8MYA2 514 aaPredicted RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 CHADO15335 359 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 ZNF862O60290 1169 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 CCNT2O60583 730 aaKnown RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 BPGMP07738 259 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 CAP2P40123 477 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 CHN2P52757 468 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 CCNIQ14094 377 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 PDK3Q15120 406 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 ZCCHC23Q6ZST2 131 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 WDR75Q8IWA0 830 aaKnown RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 PPP1R14CQ8TAE6 165 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 XAB2Q9HCS7 855 aaKnown RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 XPNPEP1Q9NQW7 623 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 SEPT9Q9UHD8 586 aaPredicted RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 USP21Q9UK80 565 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 TCP10L2B9ZVM9 353 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 KRT38O76015 456 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 C1QAP02745 245 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 KRT3P12035 628 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 NPR1P16066 1061 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 SERPINB6P35237 376 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 COPAP53621 1224 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 YWHAZP63104 245 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 IRX4P78413 519 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 DLG1Q12959 904 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 VPS72Q15906 364 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ANKRD20A4Q4UJ75 823 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ZBTB41Q5SVQ8 909 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 RNF111Q6ZNA4 994 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 CPXCR1Q8N123 301 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ARFGAP1Q8N6T3 406 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 UBR7Q8N806 425 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 RDM1Q8NG50 284 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 HSPH1Q92598 858 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ATP6V0A1Q93050 837 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 NMD3Q96D46 503 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 MPP4Q96JB8 637 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 SIKE1Q9BRV8 207 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 CALN1Q9BXU9 219 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ETNK2Q9NVF9 386 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 THAP1Q9NVV9 213 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 LMCD1Q9NZU5 365 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ZC3H7BQ9UGR2 993 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 PCSK1NQ9UHG2 260 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 BIRC5O15392 142 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 TOM1L1O75674 476 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 PDE5AO76074 875 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 KLHL2O95198 593 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 LDHAP00338 332 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 EIF4BP23588 611 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 ALDH1B1P30837 517 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 POLR2BP30876 1174 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 PTGER2P43116 358 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 RPL26P61254 145 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 MTMR2Q13614 643 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 TRIP10Q15642 601 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 RALGPS1Q5JS13 557 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ARCQ7LC44 396 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 NDUFAF2Q8N183 169 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 WDTC1Q8N5D0 677 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 POU5F2Q8N7G0 328 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 CCDC124Q96CT7 223 aaKnown RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 ZBTB45Q96K62 511 aaPredicted RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 PRMT6Q96LA8 375 aaPredicted RBP14.74□□□□□ -0.05
SRP54-202ENST00000546080 MSTO1Q9BUK6 570 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 APOL6Q9BWW8 343 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 HAPLN2Q9GZV7 340 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 EPB41L1Q9H4G0 881 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 RAB6BQ9NRW1 208 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 CLIC5Q9NZA1 410 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 STYXL1Q9Y6J8 313 aa14.74□□□□□ -0.05
SRP54-202ENST00000546080 ATP9BO43861 1147 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 DKC1O60832 514 aaKnown RBP eCLIP14.73□□□□□ -0.05
SRP54-202ENST00000546080 CSDE1O75534 798 aaKnown RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 ASLP04424 464 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 OSBPP22059 807 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 PRKCHP24723 683 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 RGS2P41220 211 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 ITGA9Q13797 1035 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 NPNTQ6UXI9 565 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 ICA1LQ8NDH6 482 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 HIPK4Q8NE63 616 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms