RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TLE6Q9H808 572 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 AGPAT5Q9NUQ2 364 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 CACNA2D2Q9NY47 1150 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 NFU1Q9UMS0 254 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 MYH6P13533 1939 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 KPNA7A9QM74 516 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 AP3B1O00203 1094 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 DYRK3O43781 588 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ZNF862O60290 1169 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ADH1AP07327 375 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 PPM1AP35813 382 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 THOP1P52888 689 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 SP2Q02086 613 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 LAMTOR4Q0VGL1 99 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 GOLGA7BQ2TAP0 167 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 SLC45A4Q5BKX6 768 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 OLFML2BQ68BL8 750 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 CENPPQ6IPU0 288 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 RETSATQ6NUM9 610 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ERAP2Q6P179 960 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 MPZL3Q6UWV2 235 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 RBM23Q86U06 439 aaKnown RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 PPHLN1Q8NEY8 458 aaKnown RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ZBTB45Q96K62 511 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 PGLYRP2Q96PD5 576 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 POP1Q99575 1024 aaKnown RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 RNF19AQ9NV58 838 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 PKD2L2Q9NZM6 624 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 LIMA1Q9UHB6 759 aaKnown RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 CHMP2BQ9UQN3 213 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 FRMPD4Q14CM0 1322 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 A0A1B0GTH6 734 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 COPEO14579 308 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 MAPK13O15264 365 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 CFLARO15519 480 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 AKAP3O75969 853 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ARIH2O95376 493 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 RFC1P35251 1148 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 NAMPTP43490 491 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 FXR1P51114 621 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 EDRF1Q3B7T1 1238 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 OLFML1Q6UWY5 402 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ADGRF2Q8IZF7 708 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 CPB2Q96IY4 423 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 PI4K2AQ9BTU6 479 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 PGAP2Q9UHJ9 254 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 TIMM13Q9Y5L4 95 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 COL2A1P02458 1487 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ESYT3A0FGR9 886 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 NCAM2O15394 837 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 FGBP02675 491 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 MDH1P40925 334 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 COPS2P61201 443 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 PRKCZQ05513 592 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 PDAP1Q13442 181 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 PABPC1LQ4VXU2 614 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ZRANB3Q5FWF4 1079 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ATG16L1Q676U5 607 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 GPAT2Q6NUI2 795 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 PKN3Q6P5Z2 889 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 RINLQ6ZS11 566 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 KIF2BQ8N4N8 673 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 DTNBP1Q96EV8 351 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 WRAP73Q9P2S5 460 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 INTUQ9ULD6 942 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 SPACA6W5XKT8 324 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 HNRNPCL2B2RXH8 293 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 SLC9A3R1O14745 358 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 PSMD3O43242 534 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 HNRNPCL1O60812 293 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ACSL3O95573 720 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 FAM107AO95990 144 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 RHOCP08134 193 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 MUTP22033 750 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 TYK2P29597 1187 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 HMOX2P30519 316 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ALS2CLQ60I27 953 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 GJB7Q6PEY0 223 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ABHD15Q6UXT9 468 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ACOT1Q86TX2 421 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 HERC6Q8IVU3 1022 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 AHCYL2Q96HN2 611 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 FMO2Q99518 471 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ELAC2Q9BQ52 826 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 GIMAP4Q9NUV9 329 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 UXTQ9UBK9 157 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 SDK1Q7Z5N4 2213 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 M0QYT0 321 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 PODXLO00592 558 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ZNF263O14978 683 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 EFCAB14O75071 495 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 MAPK9P45984 424 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 PPP3CCP48454 512 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 NR1I3Q14994 352 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 WLSQ5T9L3 541 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 NT5DC1Q5TFE4 455 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 KIAA1324Q6UXG2 1013 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 CCNI2Q6ZMN8 369 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms