RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 APOC2P02655 101 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 ALDH18A1P54886 795 aaKnown RBP15.66■□□□□ 0.1
USP28-214ENST00000545540 TMPRSS15P98073 1019 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 FAM160B1Q5W0V3 765 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 UCMAQ8WVF2 138 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 MCUR1Q96AQ8 359 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 TMEM176AQ96HP8 235 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 PPARGC1AQ9UBK2 798 aaKnown RBP15.66■□□□□ 0.1
USP28-214ENST00000545540 AKT3Q9Y243 479 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 MEI4A8MW99 385 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 H3BRJ5 948 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 COPEO14579 308 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 GPD2P43304 727 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 SERPINB4P48594 390 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 GBE1Q04446 702 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 PMF1Q6P1K2 205 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 MOCOSQ96EN8 888 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 HPDLQ96IR7 371 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 APOL6Q9BWW8 343 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 OSBPL1AQ9BXW6 950 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 C2CD2LO14523 706 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 PDGFRBP09619 1106 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 ABCG1P45844 678 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 ACSBG2Q5FVE4 666 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 RPAINQ86UA6 219 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 GPR20Q99678 358 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 ELP3Q9H9T3 547 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 DONSONQ9NYP3 566 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 TAS2R1Q9NYW7 299 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 STRIP2Q9ULQ0 834 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 WASF2Q9Y6W5 498 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 IRF6O14896 467 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 LYPLA1O75608 230 aaPredicted RBP15.65■□□□□ 0.1
USP28-214ENST00000545540 METTL18O95568 372 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 CSH1P0DML2 217 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 CSH2P0DML3 217 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 ESRRAP11474 423 aaPredicted RBP15.65■□□□□ 0.1
USP28-214ENST00000545540 PTPN4P29074 926 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 ADORA2AP29274 412 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 GCKP35557 465 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 RFC5P40937 340 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 PGGT1BP53609 377 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 CHI3L2Q15782 390 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 KLHL38Q2WGJ6 581 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 SULF1Q8IWU6 871 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 PYROXD2Q8N2H3 581 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 PPP1R12CQ9BZL4 782 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 FOXP3Q9BZS1 431 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 SENP1Q9P0U3 644 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 PCDHGC3Q9UN70 934 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 FCHO1O14526 889 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 ZNF286BP0CG31 522 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 AMPD1P23109 780 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 CCNHP51946 323 aaPredicted RBP15.65■□□□□ 0.1
USP28-214ENST00000545540 EFNA5P52803 228 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 BCAR1P56945 870 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 YWHAZP63104 245 aaKnown RBP15.65■□□□□ 0.1
USP28-214ENST00000545540 CCDC15Q0P6D6 951 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 BST1Q10588 318 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 IER5Q5VY09 327 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 CYP4V2Q6ZWL3 525 aaPredicted RBP15.65■□□□□ 0.1
USP28-214ENST00000545540 TREML1Q86YW5 311 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 PLD5Q8N7P1 536 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 FAM172AQ8WUF8 416 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 EBF4Q9BQW3 602 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 TRIM6Q9C030 488 aaPredicted RBP15.65■□□□□ 0.1
USP28-214ENST00000545540 SPATC1LQ9H0A9 340 aa15.65■□□□□ 0.1
USP28-214ENST00000545540 ZBED1O96006 694 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 GNAZP19086 355 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 PEX6Q13608 980 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 LRRC36Q1X8D7 754 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 MUM1Q2TAK8 710 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 PPP1R26Q5T8A7 1209 aaPredicted RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 NAIF1Q69YI7 327 aaPredicted RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 METTL7BQ6UX53 244 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 POLNQ7Z5Q5 900 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 PCGF5Q86SE9 256 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 CMASQ8NFW8 434 aaPredicted RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 AGR3Q8TD06 166 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 FAXDC2Q96IV6 333 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 RILPQ96NA2 401 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 PLAC1Q9HBJ0 212 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 DLDP09622 509 aaKnown RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 IL4RP24394 825 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 THOC5Q13769 683 aaKnown RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 CRYMQ14894 314 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 EML3Q32P44 896 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 HSF5Q4G112 596 aaPredicted RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 SLC45A4Q5BKX6 768 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 ISLR2Q6UXK2 745 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 SPNS2Q8IVW8 549 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 PCDH19Q8TAB3 1148 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 NRG4Q8WWG1 115 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 USP6NLQ92738 828 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 FAM161BQ96MY7 647 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 ZNF518BQ9C0D4 1074 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 DHX35Q9H5Z1 703 aaKnown RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 USP29Q9HBJ7 922 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 SNX9Q9Y5X1 595 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms