RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ZDHHC11BP0C7U3 371 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 TUBP50607 506 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 CACNA2D1P54289 1103 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 GRIN1Q05586 938 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 CAMK2BQ13554 666 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 PLEKHG6Q3KR16 790 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 TMEM25Q86YD3 366 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 GLIS3Q8NEA6 775 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 PDZD8Q8NEN9 1154 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 OR5B17Q8NGF7 314 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 MDM1Q8TC05 714 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 HSPA12BQ96MM6 686 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 SLITRK1Q96PX8 696 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 CBWD1Q9BRT8 395 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 RAXQ9Y2V3 346 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 KNTC1P50748 2209 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 KNL1Q8NG31 2342 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 SCAMP3O14828 347 aaKnown RBP15.66■□□□□ 0.1
RTN3-214ENST00000545432 KIAA0391O15091 583 aaKnown RBP15.66■□□□□ 0.1
RTN3-214ENST00000545432 TRIM24O15164 1050 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 KRT19P08727 400 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 PDGFRBP09619 1106 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 TMEM191BP0C7N4 346 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 MBL2P11226 248 aaPredicted RBP15.66■□□□□ 0.1
RTN3-214ENST00000545432 GAP43P17677 238 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 GRIK2Q13002 908 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 WDR45BQ5MNZ6 344 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 C10orf76Q5T2E6 689 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 SYCP2LQ5T4T6 812 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 BTBD8Q5XKL5 378 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 EGFLAMQ63HQ2 1017 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 HTR3DQ70Z44 454 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 SCUBE3Q8IX30 993 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 HNRNPLLQ8WVV9 542 aaKnown RBP15.66■□□□□ 0.1
RTN3-214ENST00000545432 MRGPRX1Q96LB2 322 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 ACOX2Q99424 681 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 MARK1Q9P0L2 795 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 CYP8B1Q9UNU6 501 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 PCDHB13Q9Y5F0 798 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 PTPRJQ12913 1337 aa15.66■□□□□ 0.1
RTN3-214ENST00000545432 FRMD3A2A2Y4 597 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 PRRT4C9JH25 899 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 CACNG3O60359 315 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 RTN3O95197 1032 aaPredicted RBP15.65■□□□□ 0.1
RTN3-214ENST00000545432 BMP15O95972 392 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 CISD3P0C7P0 127 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 GNSP15586 552 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 YWHAQP27348 245 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 CASP5P51878 434 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 CYP27A1Q02318 531 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 ALCAMQ13740 583 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 DUOXA2Q1HG44 320 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 MCTP1Q6DN14 999 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 BBS7Q8IWZ6 715 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 NUP93Q8N1F7 819 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 NAT16Q8N8M0 369 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 CADM4Q8NFZ8 388 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 WBP2Q969T9 261 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 ANKRD36BP1Q96IX9 119 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 ELOVL4Q9GZR5 314 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 MRPL44Q9H9J2 332 aaKnown RBP15.65■□□□□ 0.1
RTN3-214ENST00000545432 ITM2CQ9NQX7 267 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 COMMD8Q9NX08 183 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 WSB2Q9NYS7 404 aaPredicted RBP15.65■□□□□ 0.1
RTN3-214ENST00000545432 FBXO10Q9UK96 956 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 KIF3AQ9Y496 699 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 PCDHGB2Q9Y5G2 931 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 CABIN1Q9Y6J0 2220 aa15.65■□□□□ 0.1
RTN3-214ENST00000545432 ASH1LQ9NR48 2969 aaKnown RBP15.65■□□□□ 0.1
RTN3-214ENST00000545432 A0A1B0GTW7 788 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 GOLGA8IPA6NC78 632 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 GOLGA8JA6NMD2 632 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 STAU1O95793 577 aaKnown RBP15.64■□□□□ 0.09
RTN3-214ENST00000545432 CST3P01034 146 aaPredicted RBP15.64■□□□□ 0.09
RTN3-214ENST00000545432 C7P10643 843 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 PTPN1P18031 435 aaKnown RBP15.64■□□□□ 0.09
RTN3-214ENST00000545432 GNL1P36915 607 aaPredicted RBP15.64■□□□□ 0.09
RTN3-214ENST00000545432 BNC1Q01954 994 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 ENPP2Q13822 863 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 SURF1Q15526 300 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 MDH1BQ5I0G3 518 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 HECTD3Q5T447 861 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 DYMQ7RTS9 669 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 GPD1LQ8N335 351 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 C1orf216Q8TAB5 229 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 ADAM32Q8TC27 787 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 MRPL45Q9BRJ2 306 aaKnown RBP15.64■□□□□ 0.09
RTN3-214ENST00000545432 CD93Q9NPY3 652 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 USP36Q9P275 1121 aaKnown RBP15.64■□□□□ 0.09
RTN3-214ENST00000545432 STK17AQ9UEE5 414 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 PTPRBP23467 1997 aa15.64■□□□□ 0.09
RTN3-214ENST00000545432 GOLGA4Q13439 2230 aaKnown RBP15.63■□□□□ 0.09
RTN3-214ENST00000545432 ZBTB24O43167 697 aaPredicted RBP15.63■□□□□ 0.09
RTN3-214ENST00000545432 ABL1P00519 1130 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 CD6P30203 668 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 WASP42768 502 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 ZNF132P52740 706 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 GRAMD4Q6IC98 578 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 SDE2Q6IQ49 451 aa15.63■□□□□ 0.09
RTN3-214ENST00000545432 PAQR9Q6ZVX9 377 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms