RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 RNF19AQ9NV58 838 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 FLRT1Q9NZU1 646 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 SENP1Q9P0U3 644 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 RABGEF1Q9UJ41 708 aa14.52□□□□□ -0.09
MSH2-206ENST00000543555 A8MXQ7 604 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 TNPO2O14787 897 aaKnown RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 KRT15P19012 456 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 IL4RP24394 825 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 AKAP5P24588 427 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 SNX16P57768 344 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 BASP1P80723 227 aaKnown RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 HIC1Q14526 733 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 PKN2Q16513 984 aaKnown RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 ZDHHC17Q8IUH5 632 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 TGS1Q96RS0 853 aaKnown RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 TBCBQ99426 244 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 TRABDQ9H4I3 376 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 GPATCH2LQ9NWQ4 482 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 PSMC3IPQ9P2W1 217 aaPredicted RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 FETUBQ9UGM5 382 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 ZNF236Q9UL36 1845 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 AXLP30530 894 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 SSTR1P30872 391 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 SCTRP47872 440 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 GEMIN4P57678 1058 aaKnown RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 MFSD10Q14728 455 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 ZC3H12AQ5D1E8 599 aaKnown RBP14.51□□□□□ -0.09
MSH2-206ENST00000543555 C1orf228Q6PIY5 440 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 PDIK1LQ8N165 341 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 FBXO36Q8NEA4 188 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 DNAJB3Q8WWF6 145 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 LPIN3Q9BQK8 851 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 B3GNT5Q9BYG0 378 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 PCDH18Q9HCL0 1135 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 TRIP11Q15643 1979 aa14.51□□□□□ -0.09
MSH2-206ENST00000543555 PRPF4O43172 522 aaKnown RBP eCLIP14.5□□□□□ -0.099e-10■■■□□ 17.2
MSH2-206ENST00000543555 HCRTO43612 131 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 TM4SF4P48230 202 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 WDR4P57081 412 aaKnown RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 RNASELQ05823 741 aaKnown RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 FBXO47Q5MNV8 452 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 TLK2Q86UE8 772 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 PLD5Q8N7P1 536 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 TMEM40Q8WWA1 233 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 SNRNP25Q9BV90 132 aaKnown RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 KIF9Q9HAQ2 790 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 GABRQQ9UN88 632 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 PIN4Q9Y237 131 aaKnown RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 USP15Q9Y4E8 981 aaPredicted RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 H7C0C1 242 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 PIRO00625 290 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 MDM4O15151 490 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 ATP2C2O75185 946 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 SPAG7O75391 227 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 CD4P01730 458 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 DESP17661 470 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 TGM2P21980 687 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 ATP5OP48047 213 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 SLC18A1P54219 525 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 ADAM17P78536 824 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 BBS9Q3SYG4 887 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 PQLC3Q8N755 202 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 C7orf31Q8N865 590 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 KBTBD7Q8WVZ9 684 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 MRRFQ96E11 262 aaKnown RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 SMC6Q96SB8 1091 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 NCAPGQ9BPX3 1015 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 APOL1O14791 398 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 HDAC4P56524 1084 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 IL9RQ01113 521 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 IRF5Q13568 498 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 SNX17Q15036 470 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 CA9Q16790 459 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 MORN1Q5T089 497 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 OLFML2BQ68BL8 750 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 C3orf62Q6ZUJ4 267 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 TRPM8Q7Z2W7 1104 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 VSIG1Q86XK7 387 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 ACSS3Q9H6R3 686 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 USP29Q9HBJ7 922 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 KLK14Q9P0G3 267 aa14.5□□□□□ -0.09
MSH2-206ENST00000543555 SMG5Q9UPR3 1016 aaKnown RBP14.5□□□□□ -0.09
MSH2-206ENST00000543555 SMIM28A0A1B0GU29 152 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 CA12O43570 354 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 ASMTLO95671 621 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 FGFR1P11362 822 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 CCDC130P13994 396 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 TSHRP16473 764 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 PSEN2P49810 448 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 BST2Q10589 180 aaKnown RBP14.49□□□□□ -0.09
MSH2-206ENST00000543555 MAP2K5Q13163 448 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 EFTUD2Q15029 972 aaKnown RBP eCLIP14.49□□□□□ -0.093e-6■□□□□ 9.1
MSH2-206ENST00000543555 ZKSCAN8Q15776 578 aaPredicted RBP14.49□□□□□ -0.09
MSH2-206ENST00000543555 KLHL38Q2WGJ6 581 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 SLC9A4Q6AI14 798 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 CRYBG2Q8N1P7 616 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 ANKRD52Q8NB46 1076 aa14.49□□□□□ -0.09
MSH2-206ENST00000543555 PCDH19Q8TAB3 1148 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms