RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 OR8K1Q8NGG5 319 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 SLC30A5Q8TAD4 765 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 ADAMTS19Q8TE59 1207 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 CLEC4CQ8WTT0 213 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 STK32AQ8WU08 396 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 DDX1Q92499 740 aaKnown RBP6.63□□□□□ -1.35
LTBR-212ENST00000543542 NDRG1Q92597 394 aaKnown RBP6.63□□□□□ -1.35
LTBR-212ENST00000543542 SYN2Q92777 582 aaPredicted RBP6.63□□□□□ -1.35
LTBR-212ENST00000543542 SMARCD2Q92925 531 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 C18orf8Q96DM3 657 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 DOCK6Q96HP0 2047 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 CYP2S1Q96SQ9 504 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 CDK5RAP1Q96SZ6 601 aaKnown RBP6.63□□□□□ -1.35
LTBR-212ENST00000543542 UHRF1Q96T88 793 aaPredicted RBP6.63□□□□□ -1.35
LTBR-212ENST00000543542 KXD1Q9BQD3 176 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 TRIM62Q9BVG3 475 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 SLC46A2Q9BY10 475 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 TTYH3Q9C0H2 523 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 CCSER2Q9H7U1 834 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 GRPEL1Q9HAV7 217 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 ZFP14Q9HCL3 533 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 CYLDQ9NQC7 956 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 AIPL1Q9NZN9 384 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 RASAL2Q9UJF2 1139 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 STRIP2Q9ULQ0 834 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 USP3Q9Y6I4 520 aa6.63□□□□□ -1.35
LTBR-212ENST00000543542 NOTCH4Q99466 2003 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 NUP210Q8TEM1 1887 aaPredicted RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 SOBPA7XYQ1 873 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 LOC730098B7Z3J9 87 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 AKR1B10O60218 316 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 TLR5O60602 858 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 MFAP3LO75121 409 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 MOSPD3O75425 235 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 TADA3O75528 432 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 GRAP2O75791 330 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 LTFP02788 710 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 CALB1P05937 261 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 HMBSP08397 361 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 NCAM1P13591 858 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 CHRNB2P17787 502 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 VIPR2P41587 438 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 DAOAP59103 153 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 RNASE9P60153 205 aaKnown RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 NOMO3P69849 1222 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 EFEMP1Q12805 493 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 CLEC16AQ2KHT3 1053 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 C2CD6Q53TS8 623 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 FAM78AQ5JUQ0 283 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 EFHC1Q5JVL4 640 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 FAM102AQ5T9C2 384 aaPredicted RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 BSPRYQ5W0U4 402 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 PARM1Q6UWI2 310 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 MMS22LQ6ZRQ5 1243 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 FAM183BPQ6ZVS7 135 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 ZNF571Q7Z3V5 609 aaPredicted RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 PHLDB2Q86SQ0 1253 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 TMEM150AQ86TG1 271 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 DDX42Q86XP3 938 aaKnown RBP eCLIP6.62□□□□□ -1.35
LTBR-212ENST00000543542 MIB1Q86YT6 1006 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 ZDHHC17Q8IUH5 632 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 ARID3BQ8IVW6 561 aaPredicted RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 ZDHHC14Q8IZN3 488 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 GJD3Q8N144 294 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 WDTC1Q8N5D0 677 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 CELF5Q8N6W0 485 aaKnown RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 IRGQQ8WZA9 623 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 EDEM1Q92611 657 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 E2F7Q96AV8 911 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 CCDC42Q96M95 316 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 ZSWIM3Q96MP5 696 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 ASB16Q96NS5 453 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 NECAB3Q96P71 396 aaPredicted RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 CPXM1Q96SM3 734 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 C11orf70Q9BRQ4 267 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 SELENOOQ9BVL4 669 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 SLC4A5Q9BY07 1137 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 SMG9Q9H0W8 520 aaKnown RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 KIF9Q9HAQ2 790 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 NMUR1Q9HB89 426 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 ABCC13Q9NSE7 274 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 OLA1Q9NTK5 396 aaKnown RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 ABHD10Q9NUJ1 306 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 TDP1Q9NUW8 608 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 THG1LQ9NWX6 298 aaKnown RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 IL37Q9NZH6 218 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 ADAM22Q9P0K1 906 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 IGSF9Q9P2J2 1179 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 EPS15L1Q9UBC2 864 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 CYTH4Q9UIA0 394 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 DNMT3LQ9UJW3 386 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 LSM7Q9UK45 103 aaKnown RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 NUDT5Q9UKK9 219 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 SH3BP1Q9Y3L3 701 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 CPQQ9Y646 472 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 NUMBLQ9Y6R0 609 aa6.62□□□□□ -1.35
LTBR-212ENST00000543542 HELZP42694 1942 aaKnown RBP6.62□□□□□ -1.35
LTBR-212ENST00000543542 ANAPC1Q9H1A4 1944 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms