RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 TSR3Q9UJK0 312 aaKnown RBP19.99■□□□□ 0.79
SUDS3-204ENST00000543473 NCANO14594 1321 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 RBAK-RBAKDNI3L0D1 243 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 TIMM44O43615 452 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 PDGFRBP09619 1106 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 CHKAP35790 457 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 PPATQ06203 517 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 SLC30A10Q6XR72 485 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 CYP2W1Q8TAV3 490 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 SEPT1Q8WYJ6 367 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 DCUN1D5Q9BTE7 237 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 COG4Q9H9E3 785 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 SATB2Q9UPW6 733 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 MAFGO15525 162 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 ZNF23P17027 643 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 NFKBIAP25963 317 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 MLH1P40692 756 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 PDK2Q15119 407 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 DACT2Q5SW24 774 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 NBPF12Q5TAG4 269 aaPredicted RBP19.99■□□□□ 0.79
SUDS3-204ENST00000543473 RMND5BQ96G75 393 aaPredicted RBP19.99■□□□□ 0.79
SUDS3-204ENST00000543473 TCHHQ07283 1943 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 ICAM1P05362 532 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 GLRBP48167 497 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 FAM83EQ2M2I3 478 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 NAPEPLDQ6IQ20 393 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 ISLR2Q6UXK2 745 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 MARK2Q7KZI7 788 aaKnown RBP19.99■□□□□ 0.79
SUDS3-204ENST00000543473 OR6Y1Q8NGX8 325 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 KLHL25Q9H0H3 589 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 TMX2Q9Y320 296 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 LSM8O95777 96 aaKnown RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 GSTA3Q16772 222 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 ZCCHC23Q6ZST2 131 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 TDRD5Q8NAT2 981 aaKnown RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 ALG3Q92685 438 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 FAM163AQ96GL9 167 aaPredicted RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 SCN3BQ9NY72 215 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 SLCO1B7G3V0H7 640 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 WFS1O76024 890 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 XPAP23025 273 aaPredicted RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 GCLCP48506 637 aaPredicted RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 MAP3K10Q02779 954 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 DMC1Q14565 340 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 DCAF6Q58WW2 860 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 ATF7IP2Q5U623 682 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 B3GNT6Q6ZMB0 384 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 RNF148Q8N7C7 305 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 CALML6Q8TD86 181 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 KAT5Q92993 513 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 VCPIP1Q96JH7 1222 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 GPATCH2LQ9NWQ4 482 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 A8MUI8 341 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 IL18RAPO95256 599 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 GCNT1Q02742 428 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 CCDC33Q8N5R6 958 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 IPMKQ8NFU5 416 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 RDM1Q8NG50 284 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 ELMO3Q96BJ8 720 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 GRIP2Q9C0E4 1043 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 CLIC5Q9NZA1 410 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 SALL4Q9UJQ4 1053 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 FAM237BA0A1B0GVD1 139 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 DCXO43602 365 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 ATP5BP06576 529 aaKnown RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 HMOX2P30519 316 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 CCDC85BQ15834 202 aaPredicted RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 HGSNATQ68CP4 663 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 APOBEC3HQ6NTF7 200 aaKnown RBP19.98■□□□□ 0.79
SUDS3-204ENST00000543473 ZSWIM2Q8NEG5 633 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 MTMR12Q9C0I1 747 aa19.98■□□□□ 0.79
SUDS3-204ENST00000543473 MTSS1O43312 755 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 SLITRK3O94933 977 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 CCDC60Q8IWA6 550 aaPredicted RBP19.97■□□□□ 0.79
SUDS3-204ENST00000543473 FAM13CQ8NE31 585 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 GMCL1Q96IK5 515 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 DMAP1Q9NPF5 467 aaPredicted RBP19.97■□□□□ 0.79
SUDS3-204ENST00000543473 COMMD3-BMI1R4GMX3 469 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 MGRN1O60291 552 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 GRIK5Q16478 980 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 GOLGA7BQ2TAP0 167 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 TRIM60Q495X7 471 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 C9orf131Q5VYM1 1079 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 SHCBP1Q8NEM2 672 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 ZNF606Q8WXB4 792 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 RASSF9O75901 435 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 ZNF157P51786 506 aaPredicted RBP19.97■□□□□ 0.79
SUDS3-204ENST00000543473 BNIP1Q12981 228 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 ORC1Q13415 861 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 KIAA1841Q6NSI8 718 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 ZFP1Q6P2D0 407 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 NET1Q7Z628 596 aaPredicted RBP19.97■□□□□ 0.79
SUDS3-204ENST00000543473 ATPAF2Q8N5M1 289 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 DIS3LQ8TF46 1054 aaKnown RBP19.97■□□□□ 0.79
SUDS3-204ENST00000543473 FAR2Q96K12 515 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 LRRC40Q9H9A6 602 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 NFAT5O94916 1531 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 RIC1Q4ADV7 1423 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 CCL15-CCL14A0A0B4J2E2 113 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 FAM86B1E9PN63 330 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms