RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 NDC1Q9BTX1 674 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 MRPL9Q9BYD2 267 aaKnown RBP4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 KCNH6Q9H252 994 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 GSTO2Q9H4Y5 243 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 VEZTQ9HBM0 779 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 GJB4Q9NTQ9 266 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 RGL1Q9NZL6 768 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 JKAMPQ9P055 326 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 COL20A1Q9P218 1284 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 PI4KBQ9UBF8 816 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 RASAL2Q9UJF2 1139 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 FEM1BQ9UK73 627 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 SLC45A2Q9UMX9 530 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 MED16Q9Y2X0 877 aa4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 MTO1Q9Y2Z2 717 aaKnown RBP4.34□□□□□ -1.71
GTF2H3-213ENST00000543415 PMS2P1A4D2B8 440 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 CDHR4A6H8M9 788 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 PRR5-ARHGAP8B1AHC4 643 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 M0QYG6 137 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 PJA2O43164 708 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 DHX16O60231 1041 aaKnown RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 CCNT2O60583 730 aaKnown RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 SLC43A1O75387 559 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ABHD16AO95870 558 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 DNTTP04053 509 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 TK1P04183 234 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 GRPP07492 148 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 GNAT2P19087 354 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 PSMA4P25789 261 aaKnown RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 PGM1P36871 562 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ARL1P40616 181 aaPredicted RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 MSH2P43246 934 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 MAN2A2P49641 1150 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ZNF135P52742 658 aaPredicted RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 CDC16Q13042 620 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 CTBP1Q13363 440 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ERV3-1Q14264 604 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 SLC29A2Q14542 456 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 GRM7Q14831 915 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 GPATCH4Q5T3I0 446 aaKnown RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ATXN7L2Q5T6C5 722 aaPredicted RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 UTP14CQ5TAP6 766 aaKnown RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ATG16L1Q676U5 607 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 FAM111BQ6SJ93 734 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 UNC13DQ70J99 1090 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 CHD1LQ86WJ1 897 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 NGEFQ8N5V2 710 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 SLC15A4Q8N697 577 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 DNAJC5GQ8N7S2 189 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 RNF169Q8NCN4 708 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 TOR1AIP2Q8NFQ8 470 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ZFP28Q8NHY6 868 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 TBC1D15Q8TC07 691 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 STYXQ8WUJ0 223 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 MAML1Q92585 1016 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 TFAP2CQ92754 450 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 SPSB4Q96A44 273 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 C3orf49Q96BT1 292 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 C18orf8Q96DM3 657 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 PLEKHG4BQ96PX9 1271 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 YME1L1Q96TA2 773 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 CPPED1Q9BRF8 314 aaPredicted RBP4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 CENPOQ9BU64 300 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 ENKD1Q9H0I2 346 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 GRPEL1Q9HAV7 217 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 MRGBPQ9NV56 204 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 RLIMQ9NVW2 624 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 TMOD4Q9NZQ9 345 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 POGKQ9P215 609 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 SNX8Q9Y5X2 465 aa4.33□□□□□ -1.72
GTF2H3-213ENST00000543415 TRIM64A6NGJ6 449 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 TRIM64BA6NI03 449 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 TBKBP1A7MCY6 615 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 SEPT4O43236 478 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 AHCYL1O43865 530 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 USO1O60763 962 aaKnown RBP4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 AGFG2O95081 481 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 TNFRSF6BO95407 300 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 NDST3O95803 873 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 HNRNPA1P09651 372 aaKnown RBP eCLIP4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 NPPBP16860 134 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 SLC6A4P31645 630 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 HIBADHP31937 336 aaKnown RBP4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 PSMC2P35998 433 aaKnown RBP4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 BCAT1P54687 386 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 INHBCP55103 352 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 DGCR2P98153 550 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 NSUN2Q08J23 767 aaKnown RBP eCLIP4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 LRMPQ12912 555 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 MPP3Q13368 585 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 TUBA3CQ13748 450 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 UBXN2BQ14CS0 331 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 RASA2Q15283 850 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 MAPKAPK3Q16644 382 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 TSTQ16762 297 aaKnown RBP4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 INSCQ1MX18 579 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 TMEM266Q2M3C6 531 aa4.32□□□□□ -1.72
GTF2H3-213ENST00000543415 CCDC184Q52MB2 194 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms