RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 COL4A6Q14031 1691 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 ESYT3A0FGR9 886 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 MAP2K7O14733 419 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 PRPSAP2O60256 369 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 GBP1P32455 592 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 MATKP42679 507 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 CARSP49589 748 aaKnown RBP9.75□□□□□ -0.85
GNE-206ENST00000543356 ARSEP51690 589 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 TKTL1P51854 596 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 CACNA2D1P54289 1103 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 SMTNL2Q2TAL5 461 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 SH3PXD2AQ5TCZ1 1133 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 DRICH1Q6PGQ1 229 aaPredicted RBP9.75□□□□□ -0.85
GNE-206ENST00000543356 STRADAQ7RTN6 431 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 DEFB128Q7Z7B8 93 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 VSIG1Q86XK7 387 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 GRK7Q8WTQ7 553 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 ACSF2Q96CM8 615 aaPredicted RBP9.75□□□□□ -0.85
GNE-206ENST00000543356 ERP44Q9BS26 406 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 FRMD8P1Q9BZ68 369 aaPredicted RBP9.75□□□□□ -0.85
GNE-206ENST00000543356 TMEM30AQ9NV96 361 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 TMLHEQ9NVH6 421 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 PCSK1NQ9UHG2 260 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 VWA8A3KMH1 1905 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 MDM4O15151 490 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 ENDOD1O94919 500 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 ECEL1O95672 775 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 ECHS1P30084 290 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 SLC11A1P49279 550 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 DRG2P55039 364 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 HDAC4P56524 1084 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 DAOAP59103 153 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 YWHAZP63104 245 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 ATP11AP98196 1134 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 ELAVL2Q12926 359 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 IKBKEQ14164 716 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 CDO1Q16878 200 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 LRRC26Q2I0M4 334 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 BOLA3Q53S33 107 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 KCNT1Q5JUK3 1230 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 BNIPLQ7Z465 357 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 LRRTM3Q86VH5 581 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 CCDC105Q8IYK2 499 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 DCP1BQ8IZD4 617 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 C1orf54Q8WWF1 131 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 IRGQQ8WZA9 623 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 VWCEQ96DN2 955 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 TMEM209Q96SK2 561 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 HINFPQ9BQA5 517 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 TRIM51Q9BSJ1 452 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 PLEKHA4Q9H4M7 779 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 VIPAS39Q9H9C1 493 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 NGRNQ9NPE2 291 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 CHST7Q9NS84 486 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 NFU1Q9UMS0 254 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 R3HDM2Q9Y2K5 976 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 TET1Q8NFU7 2136 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 SF3B1O75533 1304 aaKnown RBP eCLIP9.74□□□□□ -0.858e-6■■■■■ 107
GNE-206ENST00000543356 TBKBP1A7MCY6 615 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 ZNF487B1APH4 448 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 SASH3O75995 380 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 ALDH2P05091 517 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 KRT10P13645 584 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 FGFR3P22607 806 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 NOS2P35228 1153 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 MRPL58Q14197 206 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 CASP8Q14790 479 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 PDK2Q15119 407 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 LLGL1Q15334 1064 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 SLC25A52Q3SY17 297 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 BBS12Q6ZW61 710 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 GPRIN1Q7Z2K8 1008 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 SPATA2LQ8IUW3 424 aaPredicted RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 KCTD6Q8NC69 237 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 FAM71BQ8TC56 605 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 IFT81Q8WYA0 676 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 HSPH1Q92598 858 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 NT5C3BQ969T7 300 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 PAWRQ96IZ0 340 aaKnown RBP9.74□□□□□ -0.85
GNE-206ENST00000543356 KCNK16Q96T55 309 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 ULBP1Q9BZM6 244 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 POPDC2Q9HBU9 364 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.74□□□□□ -0.85
GNE-206ENST00000543356 FAN1Q9Y2M0 1017 aa9.74□□□□□ -0.85
GNE-206ENST00000543356 OR6C75A6NL08 312 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 BDNFP23560 247 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 NDUFV1P49821 464 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 ADCY2Q08462 1091 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 PTK6Q13882 451 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 RAB6CQ53S08 254 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 PM20D1Q6GTS8 502 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 DEFB106AQ8N104 65 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 ATG4AQ8WYN0 398 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 FUBP3Q96I24 572 aaKnown RBP eCLIP9.73□□□□□ -0.85
GNE-206ENST00000543356 NPY6RQ99463 290 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 OXCT2Q9BYC2 517 aaPredicted RBP9.73□□□□□ -0.85
GNE-206ENST00000543356 RHOBTB2Q9BYZ6 727 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 FAM129AQ9BZQ8 928 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms