RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CAND2O75155 1236 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 IQCF3P0C7M6 154 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 ACADSBP45954 432 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 ADCY2Q08462 1091 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 TWF1Q12792 350 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 CNGA2Q16280 664 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 SCARA3Q6AZY7 606 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 ATPAF2Q8N5M1 289 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 GPATCH11Q8N954 259 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 SGF29Q96ES7 293 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 MS4A4AQ96JQ5 239 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 MUC3BQ9H195 1237 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 SMCHD1A6NHR9 2005 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 SMIM35A0A1B0GVV1 85 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 COPEO14579 308 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 BUD23O43709 281 aaKnown RBP10.55□□□□□ -0.72
TOP3A-208ENST00000542570 KPNA6O60684 536 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 HOXC6P09630 235 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 RBL1P28749 1068 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 GRM5P41594 1212 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 EML3Q32P44 896 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF697Q5TEC3 545 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 CCT6BQ92526 530 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 HIPK3Q9H422 1215 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 ZFATQ9P243 1243 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 NAALADL1Q9UQQ1 740 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 FANCGO15287 622 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 MSI1O43347 362 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 PPP1R37O75864 691 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 ITIH2P19823 946 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 LHX1P48742 406 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 RAD23BP54727 409 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CSE1LP55060 971 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 SLC6A3Q01959 620 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 GRB14Q14449 540 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 HABP4Q5JVS0 413 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CROCCP2Q86T23 111 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CDKL3Q8IVW4 592 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CCHCR1Q8TD31 782 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 USP6NLQ92738 828 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CALR3Q96L12 384 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 A0A1B0GUA9 196 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 TOMM70O94826 608 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 TYK2P29597 1187 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 LILRA4P59901 499 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 PRAMEP78395 509 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 AMPD2Q01433 879 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 TXNRD3NBQ6F5E7 133 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CRELD2Q6UXH1 353 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 TMCO2Q7Z6W1 182 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 C12orf56Q8IXR9 622 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 PRMT1Q99873 361 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 PITPNM3Q9BZ71 974 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 SHCBP1LQ9BZQ2 653 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 TKTL2Q9H0I9 626 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 MOSPD1Q9UJG1 213 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 SNX10Q9Y5X0 201 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 HMGB1P1B2RPK0 211 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 DPYSL4O14531 572 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CLGNO14967 610 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 B4GALT4O60513 344 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 MYL4P12829 197 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 ACLYP53396 1101 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 PPP2R2AP63151 447 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 NSUN2Q08J23 767 aaKnown RBP eCLIP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 FOXD4Q12950 439 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 TMEM40Q8WWA1 233 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 HAPLN2Q9GZV7 340 aa10.54□□□□□ -0.72
TOP3A-208ENST00000542570 CDC42EP4Q9H3Q1 356 aaKnown RBP10.54□□□□□ -0.72
TOP3A-208ENST00000542570 A0A0A6YYK5 440 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-208ENST00000542570 NEMP1O14524 444 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-208ENST00000542570 KRT37O76014 449 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 EDN1P05305 212 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 TROVE2P10155 538 aaKnown RBP eCLIP10.53□□□□□ -0.72
TOP3A-208ENST00000542570 DUSP4Q13115 394 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 BMPR2Q13873 1038 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 NOMO2Q5JPE7 1267 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 SDCCAG8Q86SQ7 713 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-208ENST00000542570 PYROXD2Q8N2H3 581 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 EXD1Q8NHP7 514 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF669Q96BR6 464 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-208ENST00000542570 LGMNQ99538 433 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 SGIP1Q9BQI5 828 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 KIAA1257Q9ULG3 409 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 MYH11P35749 1972 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 ARL5CA6NH57 179 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 STK25O00506 426 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 LSM8O95777 96 aaKnown RBP10.53□□□□□ -0.72
TOP3A-208ENST00000542570 PECAM1P16284 738 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-208ENST00000542570 PRLRP16471 622 aa10.53□□□□□ -0.72
TOP3A-208ENST00000542570 EIF3BP55884 814 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms