RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 EFTUD2Q15029 972 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SLC1A5Q15758 541 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 C15orf59Q2T9L4 293 aaPredicted RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 DUSP28Q4G0W2 176 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 HHATQ5VTY9 493 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SLC27A1Q6PCB7 646 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ASRGL1Q7L266 308 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 TTC30AQ86WT1 665 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ECHDC2Q86YB7 292 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 PLD5Q8N7P1 536 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF398Q8TD17 642 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SLC35F5Q8WV83 523 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 PPP1R16BQ96T49 567 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 USP29Q9HBJ7 922 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 PCDH18Q9HCL0 1135 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 GRID1Q9ULK0 1009 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 TEX264Q9Y6I9 313 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 USH1CQ9Y6N9 552 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 IQANK1A0A1B0GTG1 560 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 A0A1W2PPM1 405 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 RRN3P2A6NIE6 340 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 APOL1O14791 398 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ATP5HO75947 161 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ATP6V1G2O95670 118 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SNAI1O95863 264 aaPredicted RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 KRT4P19013 534 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SLC8A1P32418 973 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 RPL34P49207 117 aaKnown RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SF3A3Q12874 501 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 DNAJC3Q13217 504 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 PPP1R26Q5T8A7 1209 aaPredicted RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SH3PXD2AQ5TCZ1 1133 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 DPH6Q7L8W6 267 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 PQLC3Q8N755 202 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 BANPQ8N9N5 519 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ANKLE1Q8NAG6 615 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 BEST2Q8NFU1 509 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 FAM172AQ8WUF8 416 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SLC44A1Q8WWI5 657 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 KHSRPQ92945 711 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 TSPAN18Q96SJ8 248 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 PAIP2Q9BPZ3 127 aaKnown RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 MRPL45Q9BRJ2 306 aaKnown RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ADAMTS10Q9H324 1103 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ARHGEF3Q9NR81 526 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 CNTN3Q9P232 1028 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 HESX1Q9UBX0 185 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 GTF2IRD1Q9UHL9 959 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 H7C0C1 242 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 PAPSS1O43252 624 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 DCTN3O75935 186 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 UNC5CO95185 931 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 NPTXRO95502 500 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 GSTA2P09210 222 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 HOXA11P31270 313 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 EPHX2P34913 555 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ELK3P41970 407 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ATP5OP48047 213 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 GTF2A1P52655 376 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 BCAR1P56945 870 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 GRB14Q14449 540 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SETDB1Q15047 1291 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 DPYSL2Q16555 572 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 DGKDQ16760 1214 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 PMF1Q6P1K2 205 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 LVRNQ6Q4G3 990 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 NPNTQ6UXI9 565 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 FAM47EQ6ZV65 393 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SLC26A9Q7LBE3 791 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 FAM228AQ86W67 206 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 CDKL3Q8IVW4 592 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 C12orf29Q8N999 325 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 MCUQ8NE86 351 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 APBB2Q92870 758 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 LRRC39Q96DD0 335 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 C11orf84Q9BUA3 381 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SNRNP25Q9BV90 132 aaKnown RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 GCOM2Q9BZD3 368 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 KLC2Q9H0B6 622 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 VPS11Q9H270 941 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 TXLNGQ9NUQ3 528 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 CHMP2BQ9UQN3 213 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SNX9Q9Y5X1 595 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SCN1AP35498 2009 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 TCRBV9S1A1TA0A576 114 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 KBTBD13C9JR72 458 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 PDHXO00330 501 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ZBED1O96006 694 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ZFXP17010 805 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SMPD1P17405 629 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 RGS7P49802 495 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 APLP1P51693 650 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 YWHAZP63104 245 aaKnown RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF200P98182 395 aaPredicted RBP6.81□□□□□ -1.32
PTPRO-208ENST00000542557 SLC18A2Q05940 514 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 CDO1Q16878 200 aa6.81□□□□□ -1.32
PTPRO-208ENST00000542557 PREPLQ4J6C6 727 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms