RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 SPEM2Q0P670 501 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 DMC1Q14565 340 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 RSPO4Q2I0M5 234 aaPredicted RBP21.37■■□□□ 1.01
DDB1-220ENST00000542337 PREPLQ4J6C6 727 aaPredicted RBP21.37■■□□□ 1.01
DDB1-220ENST00000542337 DCAF17Q5H9S7 520 aaPredicted RBP21.37■■□□□ 1.01
DDB1-220ENST00000542337 BTBD8Q5XKL5 378 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 CLEC20AQ6ZU45 233 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 DGLUCYQ7Z3D6 616 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 CACNA2D4Q7Z3S7 1137 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 JAKMIP2Q96AA8 810 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 PNKPQ96T60 521 aa21.37■■□□□ 1.01
DDB1-220ENST00000542337 FAM124BQ9H5Z6 455 aaPredicted RBP21.37■■□□□ 1.01
DDB1-220ENST00000542337 ANAPC1Q9H1A4 1944 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 PSMA7O14818 248 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 AXIN1O15169 862 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 FOXD2O60548 495 aaPredicted RBP21.36■■□□□ 1.01
DDB1-220ENST00000542337 APODP05090 189 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 ATP5C1P36542 298 aaKnown RBP21.36■■□□□ 1.01
DDB1-220ENST00000542337 EIF2DP41214 584 aaKnown RBP21.36■■□□□ 1.01
DDB1-220ENST00000542337 PPP1R2P41236 205 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 SLC8A3P57103 927 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 GAD2Q05329 585 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 ZNF394Q53GI3 561 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 ANKRD40Q6AI12 368 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 RHBDF2Q6PJF5 856 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 NUDT18Q6ZVK8 323 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 TADA2BQ86TJ2 420 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 SEMA4DQ92854 862 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 HHIPQ96QV1 700 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 DUSP16Q9BY84 665 aa21.36■■□□□ 1.01
DDB1-220ENST00000542337 ARMCX3Q9UH62 379 aaPredicted RBP21.36■■□□□ 1.01
DDB1-220ENST00000542337 IRF1P10914 325 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 SEC13P55735 322 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 MRPS21P82921 87 aaKnown RBP21.35■■□□□ 1.01
DDB1-220ENST00000542337 C2orf27AQ580R0 203 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 ELOA2Q8IYF1 753 aaPredicted RBP21.35■■□□□ 1.01
DDB1-220ENST00000542337 FAM160A2Q8N612 972 aaPredicted RBP21.35■■□□□ 1.01
DDB1-220ENST00000542337 SPATA20Q8TB22 786 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 USP33Q8TEY7 942 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 WHAMMQ8TF30 809 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 TMEM176AQ96HP8 235 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 DUSP9Q99956 384 aaKnown RBP21.35■■□□□ 1.01
DDB1-220ENST00000542337 CISHQ9NSE2 258 aa21.35■■□□□ 1.01
DDB1-220ENST00000542337 LSM7Q9UK45 103 aaKnown RBP21.35■■□□□ 1.01
DDB1-220ENST00000542337 CDV3Q9UKY7 258 aaKnown RBP21.35■■□□□ 1.01
DDB1-220ENST00000542337 K7EQS6 105 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 PSEN1P49768 467 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 YWHAEP62258 255 aaKnown RBP21.34■■□□□ 1.01
DDB1-220ENST00000542337 LY6G5CQ5SRR4 150 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 PPP1R26Q5T8A7 1209 aaPredicted RBP21.34■■□□□ 1.01
DDB1-220ENST00000542337 TSTD1Q8NFU3 115 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 EZH1Q92800 747 aaPredicted RBP21.34■■□□□ 1.01
DDB1-220ENST00000542337 ERCC4Q92889 916 aaPredicted RBP21.34■■□□□ 1.01
DDB1-220ENST00000542337 DHTKD1Q96HY7 919 aaPredicted RBP21.34■■□□□ 1.01
DDB1-220ENST00000542337 LOXL4Q96JB6 756 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 ZFRQ96KR1 1074 aaKnown RBP21.34■■□□□ 1.01
DDB1-220ENST00000542337 METTL14Q9HCE5 456 aaKnown RBP21.34■■□□□ 1.01
DDB1-220ENST00000542337 CYLDQ9NQC7 956 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 ARHGEF4Q9NR80 690 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 DLL3Q9NYJ7 618 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 EBF1Q9UH73 591 aa21.34■■□□□ 1.01
DDB1-220ENST00000542337 CYP26A1O43174 497 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 KAT7O95251 611 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 RALAP11233 206 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 TGM1P22735 817 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 HOXC13P31276 330 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 GRIA2P42262 883 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 SLC6A11P48066 632 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 CSRP2Q16527 193 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 GAB4Q2WGN9 574 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 ANO4Q32M45 955 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 GPRIN1Q7Z2K8 1008 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 BBS7Q8IWZ6 715 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 CDK5RAP1Q96SZ6 601 aaKnown RBP21.33■■□□□ 1.01
DDB1-220ENST00000542337 PARD6AQ9NPB6 346 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 SEMA4GQ9NTN9 838 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 POLR3BQ9NW08 1133 aaPredicted RBP21.33■■□□□ 1.01
DDB1-220ENST00000542337 DNMT3LQ9UJW3 386 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 NAGPAQ9UK23 515 aa21.33■■□□□ 1.01
DDB1-220ENST00000542337 A0A1W2PQH9 124 aa21.32■■□□□ 1
DDB1-220ENST00000542337 HHLA1C9JL84 531 aa21.32■■□□□ 1
DDB1-220ENST00000542337 ALDH1A2O94788 518 aa21.32■■□□□ 1
DDB1-220ENST00000542337 TBX18O95935 607 aa21.32■■□□□ 1
DDB1-220ENST00000542337 RARGP13631 454 aa21.32■■□□□ 1
DDB1-220ENST00000542337 TNFRSF4P43489 277 aa21.32■■□□□ 1
DDB1-220ENST00000542337 PLA2G4AP47712 749 aa21.32■■□□□ 1
DDB1-220ENST00000542337 DGKEP52429 567 aa21.32■■□□□ 1
DDB1-220ENST00000542337 KIF11P52732 1056 aa21.32■■□□□ 1
DDB1-220ENST00000542337 HSF5Q4G112 596 aaPredicted RBP21.32■■□□□ 1
DDB1-220ENST00000542337 C10orf120Q5SQS8 335 aa21.32■■□□□ 1
DDB1-220ENST00000542337 KLHDC10Q6PID8 442 aa21.32■■□□□ 1
DDB1-220ENST00000542337 HTR3DQ70Z44 454 aa21.32■■□□□ 1
DDB1-220ENST00000542337 ZC3H3Q8IXZ2 948 aaKnown RBP21.32■■□□□ 1
DDB1-220ENST00000542337 TATDN2Q93075 761 aa21.32■■□□□ 1
DDB1-220ENST00000542337 KLF16Q9BXK1 252 aaPredicted RBP21.32■■□□□ 1
DDB1-220ENST00000542337 UBXN6Q9BZV1 441 aa21.32■■□□□ 1
DDB1-220ENST00000542337 SPHK2Q9NRA0 654 aa21.32■■□□□ 1
DDB1-220ENST00000542337 DEC1Q9P2X7 70 aa21.32■■□□□ 1
DDB1-220ENST00000542337 TBC1D3BA6NDS4 549 aa21.31■■□□□ 1
DDB1-220ENST00000542337 HOXC11O43248 304 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms