RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 ACAD10Q6JQN1 1059 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 SLFN11Q7Z7L1 901 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 ZDHHC17Q8IUH5 632 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 SLC25A41Q8N5S1 370 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 IPMKQ8NFU5 416 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 TRAIPQ9BWF2 469 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 APPL1Q9UKG1 709 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 TTC7AQ9ULT0 858 aaPredicted RBP10.69□□□□□ -0.7
POLR1B-217ENST00000541869 Q9Y3F1 56 aa10.69□□□□□ -0.7
POLR1B-217ENST00000541869 TBC1D4O60343 1298 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 DARSP14868 501 aaKnown RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 SMPD1P17405 629 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 NDST1P52848 882 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 C2orf54Q08AI8 447 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 DBN1Q16643 649 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 HLA-DQA1Q5Y7H0 255 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 FAM124AQ86V42 546 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 TMCO5AQ8N6Q1 288 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 TAS1R2Q8TE23 839 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 WHAMMQ8TF30 809 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 NECTIN4Q96NY8 510 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 RAD18Q9NS91 495 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 TRMT13Q9NUP7 481 aaKnown RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 EOMESO95936 686 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 FGFR1P11362 822 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 TNNI3P19429 210 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 CHRM3P20309 590 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 SERPINA4P29622 427 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 PLA2G4AP47712 749 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 NPY2RP49146 381 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 CASP4P49662 377 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 MARSP56192 900 aaKnown RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 RASSF3Q86WH2 238 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 ANKLE1Q8NAG6 615 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.68□□□□□ -0.71e-6■■■□□ 17.4
POLR1B-217ENST00000541869 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 ROBO3Q96MS0 1386 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 A0A1B0GTH6 734 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 CACNB4O00305 520 aaPredicted RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 GFAPP14136 432 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 ITGB5P18084 799 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 ITGAXP20702 1163 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 PBLDP30039 288 aaPredicted RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 OR1E1P30953 314 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 ICAM3P32942 547 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 GEMP55040 296 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 IL1RL1Q01638 556 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 NAB2Q15742 525 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 SETMARQ53H47 684 aaPredicted RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 TRIM65Q6PJ69 517 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 UNC93AQ86WB7 457 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 SLC35G2Q8TBE7 412 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 NMRK1Q9NWW6 199 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 GULP1Q9UBP9 304 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 TMEM253P0C7T8 217 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 MSH3P20585 1137 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 FSHRP23945 695 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 HMOX2P30519 316 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 SNRPD1P62314 119 aaKnown RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 EPC2Q52LR7 807 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 HJURPQ8NCD3 748 aaPredicted RBP10.68□□□□□ -0.7
POLR1B-217ENST00000541869 HERVK_113Q902F9 699 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 E2F7Q96AV8 911 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 LENG9Q96B70 501 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 CXorf40BQ96DE9 158 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 CDH9Q9ULB4 789 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 CDY1Q9Y6F8 540 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 ATRNL1Q5VV63 1379 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 NRXN3Q9Y4C0 1643 aa10.68□□□□□ -0.7
POLR1B-217ENST00000541869 RASSF9O75901 435 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 MAPK8P45983 427 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 EIF3BP55884 814 aaKnown RBP10.67□□□□□ -0.7
POLR1B-217ENST00000541869 HPCAP84074 193 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 BCL2L1Q07817 233 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 TP53BP2Q13625 1128 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 HSDL1Q3SXM5 330 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 DTNBP1Q96EV8 351 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 CABS1Q96KC9 395 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 IL12RB2Q99665 862 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 GTPBP2Q9BX10 602 aaKnown RBP10.67□□□□□ -0.7
POLR1B-217ENST00000541869 GTF3C4Q9UKN8 822 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 SNX24Q9Y343 169 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 A0A1W2PQJ5 194 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 GRID2IPA4D2P6 1211 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 H3BM21 787 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 PER2O15055 1255 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 ATP9AO75110 1047 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 CAPZA2P47755 286 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.72e-7■■■■■ 26.8
POLR1B-217ENST00000541869 ARID5BQ14865 1188 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 LINC00523Q86TU6 105 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 TRMT61BQ9BVS5 477 aaKnown RBP10.67□□□□□ -0.7
POLR1B-217ENST00000541869 VPS11Q9H270 941 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 TMEM161AQ9NX61 479 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 ZDHHC9Q9Y397 364 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 FAM187AA6NFU0 413 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 C8AP07357 584 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 PAEPP09466 180 aa10.67□□□□□ -0.7
POLR1B-217ENST00000541869 SCNN1BP51168 640 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms