RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 PCDH15Q96QU1 1955 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 GON4LQ3T8J9 2241 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 FAM221BA6H8Z2 402 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 TBC1D3BA6NDS4 549 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 SRRM3A6NNA2 597 aaPredicted RBP13.89□□□□□ -0.19
SCARB1-207ENST00000541661 TULP3O75386 442 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 SERPINF2P08697 491 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 GABRG2P18507 467 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 SYT1P21579 422 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 MAPK8P45983 427 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 MYL6P60660 151 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 BTBD8Q5XKL5 378 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 PAQR9Q6ZVX9 377 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 ZNF513Q8N8E2 541 aaPredicted RBP13.89□□□□□ -0.19
SCARB1-207ENST00000541661 TERB1Q8NA31 727 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 XXYLT1Q8NBI6 393 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 CUEDC2Q9H467 287 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 VRTNQ9H8Y1 702 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 CAPN10Q9HC96 672 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 HCN2Q9UL51 889 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 DMXL2Q8TDJ6 3036 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 ATP8B3O60423 1300 aa13.89□□□□□ -0.19
SCARB1-207ENST00000541661 HYAL3O43820 417 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-207ENST00000541661 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-207ENST00000541661 NTSR1P30989 418 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-207ENST00000541661 AMPD3Q01432 767 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
SCARB1-207ENST00000541661 IFRD2Q12894 506 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-207ENST00000541661 HTR3DQ70Z44 454 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 RABEPKQ7Z6M1 372 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 TMEM25Q86YD3 366 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 BBS7Q8IWZ6 715 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 SCAMP5Q8TAC9 235 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-207ENST00000541661 CCDC127Q96BQ5 260 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 CD248Q9HCU0 757 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 CACNA1GO43497 2377 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 UBE4BO95155 1302 aa13.88□□□□□ -0.19
SCARB1-207ENST00000541661 ATXN2Q99700 1313 aaKnown RBP13.88□□□□□ -0.19
SCARB1-207ENST00000541661 A0A1W2PQF6 199 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 H0Y626 953 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 CLIC2O15247 247 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 TRIM16O95361 564 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 CFIP05156 583 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 CYP2J2P51589 502 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 SLC5A3P53794 718 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 SIM1P81133 766 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-207ENST00000541661 GFPT1Q06210 699 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-207ENST00000541661 EHHADHQ08426 723 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 TRPC3Q13507 836 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 C10orf76Q5T2E6 689 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 KIAA1211LQ6NV74 962 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 FAM35AQ86V20 835 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 C12orf56Q8IXR9 622 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 HDDC3Q8N4P3 179 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 SCFD1Q8WVM8 642 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 ZCCHC14Q8WYQ9 949 aaKnown RBP13.87□□□□□ -0.19
SCARB1-207ENST00000541661 WBP2Q969T9 261 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 C7orf25Q9BPX7 421 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-207ENST00000541661 DMAP1Q9NPF5 467 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-207ENST00000541661 CALCOCO1Q9P1Z2 691 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
SCARB1-207ENST00000541661 NXF1Q9UBU9 619 aaKnown RBP13.87□□□□□ -0.19
SCARB1-207ENST00000541661 BAHCC1Q9P281 2608 aa13.87□□□□□ -0.19
SCARB1-207ENST00000541661 IGHV1OR15-9A0A0B4J2B8 117 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 SPAARA0A1B0GVQ0 90 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 ARHGAP33O14559 1287 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 TRIM24O15164 1050 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 GREM1O60565 184 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 OPHN1O60890 802 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 ZNF217O75362 1048 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 HOXB2P14652 356 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 ATXN3P54252 364 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-207ENST00000541661 CDH8P55286 799 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 CLDN10P78369 228 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 ZNF33AQ06730 810 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 HNRNPDQ14103 355 aaKnown RBP13.86□□□□□ -0.19
SCARB1-207ENST00000541661 MIB1Q86YT6 1006 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 FUKQ8N0W3 1084 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 LINC00301Q8NCQ3 95 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 SMARCD1Q96GM5 515 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 TNIP3Q96KP6 325 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 CSNK1G1Q9HCP0 422 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 DNAAF2Q9NVR5 837 aaKnown RBP13.86□□□□□ -0.19
SCARB1-207ENST00000541661 GMIPQ9P107 970 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 KLK13Q9UKR3 277 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 PKD1L2Q7Z442 2459 aa13.86□□□□□ -0.19
SCARB1-207ENST00000541661 ATRXP46100 2492 aa13.85□□□□□ -0.19
SCARB1-207ENST00000541661 A0A1W2PQD8 194 aa13.85□□□□□ -0.19
SCARB1-207ENST00000541661 CACNG3O60359 315 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms