RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SLC30A5Q8TAD4 765 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 SNX19Q92543 992 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 SPSB4Q96A44 273 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 FBXL20Q96IG2 436 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 LRIG1Q96JA1 1093 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 PDLIM2Q96JY6 352 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 UBXN10Q96LJ8 280 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 SEC62Q99442 399 aaKnown RBP4.85□□□□□ -1.63
SNHG1-217ENST00000541578 HEYLQ9NQ87 328 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-217ENST00000541578 FOXJ2Q9P0K8 574 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 PTGFRNQ9P2B2 879 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 PLEKHM1Q9Y4G2 1056 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 KIF27Q86VH2 1401 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 KIF21BO75037 1637 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 ZCCHC11Q5TAX3 1644 aaKnown RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 WDR7Q9Y4E6 1490 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 CARMIL1Q5VZK9 1371 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 FAM234BA2RU67 622 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 E9PLN8 166 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 M0QYG6 137 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 POLRMTO00411 1230 aaKnown RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 AREL1O15033 823 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 CHEK2O96017 543 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 PYGLP06737 847 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 XRCC6P12956 609 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 IL1R2P27930 398 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 KRT9P35527 623 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 PTH2RP49190 550 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 POLE2P56282 527 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 MC2RQ01718 297 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 SLC29A2Q14542 456 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 HLXQ14774 488 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 KIF22Q14807 665 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 ARL6IP4Q66PJ3 421 aaKnown RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 KAZNQ674X7 775 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 FAAH2Q6GMR7 532 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 MZT2AQ6P582 158 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 LVRNQ6Q4G3 990 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 CYP26C1Q6V0L0 522 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 MICALCLQ6ZW33 695 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 RD3Q7Z3Z2 195 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 CCDC117Q8IWD4 279 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 TOR1AIP2Q8NFQ8 470 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 IPO4Q8TEX9 1081 aaKnown RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 LPIN2Q92539 896 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 NELL1Q92832 810 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 SNX27Q96L92 541 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 PPM1MQ96MI6 270 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 MOGAT1Q96PD6 335 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 BBC3Q96PG8 261 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 PPP1R9BQ96SB3 815 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 PRPF18Q99633 342 aaKnown RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 VKORC1Q9BQB6 163 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 SLC26A6Q9BXS9 759 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 MS4A7Q9GZW8 240 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 UNC45AQ9H3U1 944 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 R3HDMLQ9H3Y0 253 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 GPR35Q9HC97 309 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
SNHG1-217ENST00000541578 ITM2CQ9NQX7 267 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 COX11Q9Y6N1 276 aa4.84□□□□□ -1.63
SNHG1-217ENST00000541578 BCORL1Q5H9F3 1711 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 SPATA31A6Q5VVP1 1343 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 SPATA31A3Q5VYP0 1347 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 CCDC151A5D8V7 595 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 HMX3A6NHT5 357 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 AQP12BA6NM10 295 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 J3KRW8 73 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 RAB27BO00194 218 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 PIP5K1BO14986 540 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 NPC1O15118 1278 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 MPPED1O15442 326 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 PROM1O43490 865 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 ORC4O43929 436 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 NDST3O95803 873 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 ITGA2BP08514 1039 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 TNFAIP3P21580 790 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 SERPINF1P36955 418 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 PAPOLAP51003 745 aaKnown RBP4.83□□□□□ -1.64
SNHG1-217ENST00000541578 ZNF135P52742 658 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-217ENST00000541578 CACNA2D1P54289 1103 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 G3BP1Q13283 466 aaKnown RBP eCLIP4.83□□□□□ -1.64
SNHG1-217ENST00000541578 PDE1CQ14123 709 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-217ENST00000541578 RAB30Q15771 203 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 KIAA0895LQ68EN5 471 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 TMPRSS9Q7Z410 1059 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 NME8Q8N427 588 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 BOLLQ8N9W6 283 aaKnown RBP4.83□□□□□ -1.64
SNHG1-217ENST00000541578 POC1BQ8TC44 478 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 FAM71BQ8TC56 605 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 RAPGEF4Q8WZA2 1011 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 C18orf8Q96DM3 657 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 ZNF764Q96H86 408 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-217ENST00000541578 PGBD1Q96JS3 809 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 CNPPD1Q9BV87 410 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 DPH1Q9BZG8 443 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 CHST8Q9H2A9 424 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 PRDM13Q9H4Q3 707 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms