RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 STARD7Q9NQZ5 370 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 NME7Q9Y5B8 376 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 CAPN7Q9Y6W3 813 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 TDRD15B5MCY1 1934 aaKnown RBP15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 hCG_1818297A0A087WSY0 165 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 CTSHP09668 335 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 FGFR1P11362 822 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 ZNF618Q5T7W0 954 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 DCLRE1AQ6PJP8 1040 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 FAM183BPQ6ZVS7 135 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 SLC24A5Q71RS6 500 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 CCDC197Q8NCU1 140 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 PPP1R13LQ8WUF5 828 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 NKD2Q969F2 451 aaPredicted RBP15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 PHACTR1Q9C0D0 580 aa15.32■□□□□ 0.04
SPOCK3-226ENST00000541354 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 PTPN1P18031 435 aaKnown RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 CDKN2BP42772 138 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 VSTM1Q6UX27 236 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 PHLDB2Q86SQ0 1253 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 CCDC25Q86WR0 208 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 JOSD2Q8TAC2 188 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 CENPIQ92674 756 aaPredicted RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 ARHGEF2Q92974 986 aaKnown RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 GAD1Q99259 594 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 HEMGNQ9BXL5 484 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 C9IYK1 514 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 E5RJQ4 531 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 F8VP50 259 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 TRUB2O95900 331 aaKnown RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 PDE4CQ08493 712 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 MAPRE1Q15691 268 aaKnown RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 OR6B2Q6IFH4 312 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 BBS12Q6ZW61 710 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 METTL23Q86XA0 190 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 TDRPQ86YL5 185 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 ALLCQ8N6M5 410 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 UBA3Q8TBC4 463 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 ZNF296Q8WUU4 475 aaPredicted RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 CCDC114Q96M63 670 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 ADAM2Q99965 735 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 C11orf84Q9BUA3 381 aaPredicted RBP15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 PNPLA8Q9NP80 782 aa15.31■□□□□ 0.04
SPOCK3-226ENST00000541354 C3orf70A6NLC5 250 aaPredicted RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 GOLGA8SH3BPF8 625 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 DNALI1O14645 258 aaPredicted RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 MDM4O15151 490 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 RASSF9O75901 435 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 OAS1P00973 400 aaKnown RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 SELPP16109 830 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 RASA2Q15283 850 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 OASLQ15646 514 aaKnown RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 KYNUQ16719 465 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 LONRF1Q17RB8 773 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 RNF187Q5TA31 235 aaPredicted RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 IZUMO3Q5VZ72 239 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 PMF1Q6P1K2 205 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 CCDC13Q8IYE1 715 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 ACBD6Q9BR61 282 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 TRIM62Q9BVG3 475 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 TRMT13Q9NUP7 481 aaKnown RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 USTQ9Y2C2 406 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 CCT8L1PA6NM43 557 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 SMAPO00193 183 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 MGEA5O60502 916 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 CDH16O75309 829 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 ACSL3O95573 720 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 ITGAVP06756 1048 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 GSTA1P08263 222 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 SLCO1A2P46721 670 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 DAB2IPQ5VWQ8 1189 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 STRADAQ7RTN6 431 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 OSTM1Q86WC4 334 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 MAP7D3Q8IWC1 876 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 ANKS4BQ8N8V4 417 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 NSRP1Q9H0G5 558 aaKnown RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 PPCSQ9HAB8 311 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 PAK6Q9NQU5 681 aaPredicted RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 DNAJC8O75937 253 aaPredicted RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 NPR3P17342 541 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 HNRNPH1P31943 449 aaKnown RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 SLC18A1P54219 525 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 MFSD7Q6UXD7 560 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 BEND5Q7L4P6 421 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 C12orf29Q8N999 325 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 UHMK1Q8TAS1 419 aaKnown RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 URGCPQ8TCY9 931 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 ZFP42Q96MM3 310 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 TTC25Q96NG3 672 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 PRMT1Q99873 361 aaKnown RBP15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 CCDC77Q9BR77 488 aa15.3■□□□□ 0.04
SPOCK3-226ENST00000541354 SMIM23A6NLE4 172 aa15.29■□□□□ 0.04
SPOCK3-226ENST00000541354 DAB1O75553 588 aa15.29■□□□□ 0.04
SPOCK3-226ENST00000541354 KDELR1P24390 212 aa15.29■□□□□ 0.04
SPOCK3-226ENST00000541354 SDC4P31431 198 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms