RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PCDHA10Q9Y5I2 948 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 COL4A6Q14031 1691 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 IGSF9BQ9UPX0 1349 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 NPHP3-ACAD11A0A0J9YXS1 232 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 PI4K2BG5E9Z4 385 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 BACH1O14867 736 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 CLIC2O15247 247 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 MAGEC1O60732 1142 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 GPR37L1O60883 481 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 PEX11AO75192 247 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 HAUS5O94927 633 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 CHRNA1P02708 482 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 PTPN7P35236 360 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 CASP4P49662 377 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 CASP5P51878 434 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 GCNT1Q02742 428 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 DLX2Q07687 328 aaPredicted RBP10.86□□□□□ -0.67
CHFR-219ENST00000541341 TMEM62Q0P6H9 643 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 AP1B1Q10567 949 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 MAP7Q14244 749 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 SIX1Q15475 284 aaPredicted RBP10.86□□□□□ -0.67
CHFR-219ENST00000541341 PTPROQ16827 1216 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 GSTA5Q7RTV2 222 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 MIER3Q7Z3K6 550 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 ADGRG6Q86SQ4 1221 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 ALYREFQ86V81 257 aaKnown RBP10.86□□□□□ -0.67
CHFR-219ENST00000541341 NME8Q8N427 588 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 STKLD1Q8NE28 680 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 FAM13CQ8NE31 585 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 SPDYE1Q8NFV5 336 aaPredicted RBP10.86□□□□□ -0.67
CHFR-219ENST00000541341 MGARPQ8TDB4 240 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
CHFR-219ENST00000541341 DENND1AQ8TEH3 1009 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 MAML1Q92585 1016 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 RBM15Q96T37 977 aaKnown RBP eCLIP10.86□□□□□ -0.673e-8■□□□□ 9.9
CHFR-219ENST00000541341 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 MYLK2Q9H1R3 596 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 SLC24A3Q9HC58 644 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 NR2E1Q9Y466 385 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 ZMYM2Q9UBW7 1377 aa10.86□□□□□ -0.67
CHFR-219ENST00000541341 IQANK1A0A1B0GTG1 560 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 H3BNC9 293 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 KLF11O14901 512 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 ALOX15BO15296 676 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 GRM6O15303 877 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 GYG2O15488 501 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 LINC01565O15544 149 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 LYPLA2O95372 231 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 P4HBP07237 508 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 PSAPP07602 524 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 CA4P22748 312 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 TCF7P36402 384 aaPredicted RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 PTDSS1P48651 473 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 GPC3P51654 580 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 GEMIN4P57678 1058 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 AP2B1P63010 937 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 BIRC2Q13490 618 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 LRRC14Q15048 493 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 KYNUQ16719 465 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 TRMT5Q32P41 509 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 PAN2Q504Q3 1202 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 HSP90AA5PQ58FG0 334 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 IZUMO3Q5VZ72 239 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 TMEM154Q6P9G4 183 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 AAGABQ6PD74 315 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 C4orf50Q6ZRC1 276 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 PLPPR4Q7Z2D5 763 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 ADAT2Q7Z6V5 191 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 CHSY1Q86X52 802 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 ALDH16A1Q8IZ83 802 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 FIBCD1Q8N539 461 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 ATP11CQ8NB49 1132 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 LMO3Q8TAP4 145 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 CCDC110Q8TBZ0 833 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 EPS8L1Q8TE68 723 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 DNAJB3Q8WWF6 145 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 PSPC1Q8WXF1 523 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 PCYT2Q99447 389 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 PAIP2Q9BPZ3 127 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 STRA6Q9BX79 667 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 FGFBP2Q9BYJ0 223 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 YIPF3Q9GZM5 350 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 FAM49AQ9H0Q0 323 aaPredicted RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 STN1Q9H668 368 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 GPAMQ9HCL2 828 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 TMEM8AQ9HCN3 771 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 ALG13Q9NP73 1137 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 EURLQ9NYK6 297 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 WDR35Q9P2L0 1181 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 BCAP29Q9UHQ4 241 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 NOCTQ9UK39 431 aaKnown RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 PCDHB2Q9Y5E7 798 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
CHFR-219ENST00000541341 IKBKGQ9Y6K9 419 aa10.85□□□□□ -0.67
CHFR-219ENST00000541341 TMEM110-MUSTN1A8MSY1 372 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms