RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ATP8B3O60423 1300 aa28.45■■■□□ 2.15
CHFR-218ENST00000540963 ATXN2Q99700 1313 aaKnown RBP28.45■■■□□ 2.15
CHFR-218ENST00000540963 SPAARA0A1B0GVQ0 90 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 GABRG2P18507 467 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 TNNI1P19237 187 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 SNRPFP62306 86 aaKnown RBP28.45■■■□□ 2.14
CHFR-218ENST00000540963 ZNF33AQ06730 810 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 PSMD6Q15008 389 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 ZNF423Q2M1K9 1284 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 LRSAM1Q6UWE0 723 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 CGRRF1Q99675 332 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 TNMDQ9H2S6 317 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 SPHK2Q9NRA0 654 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 KLK13Q9UKR3 277 aa28.45■■■□□ 2.14
CHFR-218ENST00000540963 A0A087X0B3 334 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 A8MXQ7 604 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 ZBTB24O43167 697 aaPredicted RBP28.44■■■□□ 2.14
CHFR-218ENST00000540963 DLATP10515 647 aaKnown RBP28.44■■■□□ 2.14
CHFR-218ENST00000540963 HOXB2P14652 356 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 NTSR1P30989 418 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 ATICP31939 592 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 DPEP3Q9H4B8 488 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 ZDHHC4Q9NPG8 344 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 DNAAF2Q9NVR5 837 aaKnown RBP28.44■■■□□ 2.14
CHFR-218ENST00000540963 CALCOCO1Q9P1Z2 691 aa28.44■■■□□ 2.14
CHFR-218ENST00000540963 DSPP15924 2871 aaKnown RBP28.44■■■□□ 2.14
CHFR-218ENST00000540963 FAM92AA1XBS5 289 aa28.43■■■□□ 2.14
CHFR-218ENST00000540963 SYPP08247 313 aa28.43■■■□□ 2.14
CHFR-218ENST00000540963 HOXD13P35453 343 aa28.43■■■□□ 2.14
CHFR-218ENST00000540963 IFRD2Q12894 506 aaPredicted RBP28.43■■■□□ 2.14
CHFR-218ENST00000540963 SLC14A1Q13336 389 aa28.43■■■□□ 2.14
CHFR-218ENST00000540963 C10orf76Q5T2E6 689 aa28.43■■■□□ 2.14
CHFR-218ENST00000540963 ZNF507Q8TCN5 953 aa28.43■■■□□ 2.14
CHFR-218ENST00000540963 GTPBP2Q9BX10 602 aaKnown RBP28.43■■■□□ 2.14
CHFR-218ENST00000540963 A0A1W2PQD8 194 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 CLDN5O00501 218 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 ARHGAP33O14559 1287 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 ZDHHC11BP0C7U3 371 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 RING1Q06587 406 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 ACAP1Q15027 740 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 BBS7Q8IWZ6 715 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 MINDY1Q8N5J2 469 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 NAT16Q8N8M0 369 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 GLIS3Q8NEA6 775 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 SYAP1Q96A49 352 aaPredicted RBP28.42■■■□□ 2.14
CHFR-218ENST00000540963 PANK2Q9BZ23 570 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 VRTNQ9H8Y1 702 aa28.42■■■□□ 2.14
CHFR-218ENST00000540963 CHORDC1Q9UHD1 332 aaPredicted RBP28.42■■■□□ 2.14
CHFR-218ENST00000540963 IGHV1OR15-9A0A0B4J2B8 117 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 A0A1W2PQF6 199 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 HOXB3P14651 431 aaPredicted RBP28.41■■■□□ 2.14
CHFR-218ENST00000540963 CYP24A1Q07973 514 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 TRPC3Q13507 836 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 CUL4AQ13619 759 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 SLC39A14Q15043 492 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 SDE2Q6IQ49 451 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 EPM2AIP1Q7L775 607 aaPredicted RBP28.41■■■□□ 2.14
CHFR-218ENST00000540963 KCNK16Q96T55 309 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 CUEDC2Q9H467 287 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 UPF2Q9HAU5 1272 aaKnown RBP28.41■■■□□ 2.14
CHFR-218ENST00000540963 CD248Q9HCU0 757 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 DMAP1Q9NPF5 467 aaPredicted RBP28.41■■■□□ 2.14
CHFR-218ENST00000540963 AGPAT3Q9NRZ7 376 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 KBTBD4Q9NVX7 518 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 LHX6Q9UPM6 363 aa28.41■■■□□ 2.14
CHFR-218ENST00000540963 CD59P13987 128 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 ANO4Q32M45 955 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 CNNM4Q6P4Q7 775 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 RAB44Q7Z6P3 723 aaPredicted RBP28.4■■■□□ 2.14
CHFR-218ENST00000540963 TMEM25Q86YD3 366 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 XXYLT1Q8NBI6 393 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 RDH13Q8NBN7 331 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 SMARCD1Q96GM5 515 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 TNIP3Q96KP6 325 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 TRIM9Q9C026 710 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 XYLT2Q9H1B5 865 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 FAM124BQ9H5Z6 455 aaPredicted RBP28.4■■■□□ 2.14
CHFR-218ENST00000540963 HCN2Q9UL51 889 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 UBE4BO95155 1302 aa28.4■■■□□ 2.14
CHFR-218ENST00000540963 TGFB1I1O43294 461 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 SLC5A3P53794 718 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 AMPD3Q01432 767 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 GRAMD4Q6IC98 578 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 HTR3DQ70Z44 454 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 FAM35AQ86V20 835 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 SCAMP5Q8TAC9 235 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 CCDC127Q96BQ5 260 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 XPO6Q96QU8 1125 aaKnown RBP28.39■■■□□ 2.14
CHFR-218ENST00000540963 GABRG3Q99928 467 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 CCSER2Q9H7U1 834 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 SUSD2Q9UGT4 822 aa28.39■■■□□ 2.14
CHFR-218ENST00000540963 CACNG3O60359 315 aa28.38■■■□□ 2.13
CHFR-218ENST00000540963 CAPNS1P04632 268 aa28.38■■■□□ 2.13
CHFR-218ENST00000540963 MYL6P60660 151 aa28.38■■■□□ 2.13
CHFR-218ENST00000540963 CEBPZQ03701 1054 aaKnown RBP28.38■■■□□ 2.13
CHFR-218ENST00000540963 SLC41A1Q8IVJ1 513 aa28.38■■■□□ 2.13
CHFR-218ENST00000540963 PDILTQ8N807 584 aa28.38■■■□□ 2.13
CHFR-218ENST00000540963 IPO4Q8TEX9 1081 aaKnown RBP28.38■■■□□ 2.13
CHFR-218ENST00000540963 HPS3Q969F9 1004 aa28.38■■■□□ 2.13
CHFR-218ENST00000540963 ZNF419Q96HQ0 510 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms