RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 FSTL4Q6MZW2 842 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 KLHDC10Q6PID8 442 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 BHLHA9Q7RTU4 235 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 SCD5Q86SK9 330 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 PIGZQ86VD9 579 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 ADGRG2Q8IZP9 1017 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 TFAP2BQ92481 460 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 THAP9Q9H5L6 903 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 TLR8Q9NR97 1041 aaKnown RBP14.97□□□□□ -0.01
USP28-209ENST00000540925 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.97□□□□□ -0.01
USP28-209ENST00000540925 SPATA6Q9NWH7 488 aaPredicted RBP14.97□□□□□ -0.01
USP28-209ENST00000540925 SMPD4Q9NXE4 827 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 TSPAN16Q9UKR8 245 aa14.97□□□□□ -0.01
USP28-209ENST00000540925 E2F8A0AVK6 867 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 TULP2O00295 520 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 PAPSS2O95340 614 aaPredicted RBP14.96□□□□□ -0.01
USP28-209ENST00000540925 MBL2P11226 248 aaPredicted RBP14.96□□□□□ -0.01
USP28-209ENST00000540925 VDRP11473 427 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 IFNAR2P48551 515 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 GOLGA7BQ2TAP0 167 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 SGO2Q562F6 1265 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 NAIF1Q69YI7 327 aaPredicted RBP14.96□□□□□ -0.01
USP28-209ENST00000540925 TMEM270Q6UE05 265 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 LCLAT1Q6UWP7 414 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 RRAGAQ7L523 313 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 DDX42Q86XP3 938 aaKnown RBP eCLIP14.96□□□□□ -0.01
USP28-209ENST00000540925 PPM1KQ8N3J5 372 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 SYNPOQ8N3V7 929 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 CPA6Q8N4T0 437 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 EZH1Q92800 747 aaPredicted RBP14.96□□□□□ -0.01
USP28-209ENST00000540925 WBP2Q969T9 261 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 JAKMIP2Q96AA8 810 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 KLF16Q9BXK1 252 aaPredicted RBP14.96□□□□□ -0.01
USP28-209ENST00000540925 FBRSL1Q9HCM7 1045 aaKnown RBP14.96□□□□□ -0.01
USP28-209ENST00000540925 RBM12Q9NTZ6 932 aaKnown RBP14.96□□□□□ -0.01
USP28-209ENST00000540925 CLIC5Q9NZA1 410 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 CFAP97Q9P2B7 532 aa14.96□□□□□ -0.01
USP28-209ENST00000540925 A0A1W2PQH9 124 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 GTPBP10A4D1E9 387 aaKnown RBP14.95□□□□□ -0.02
USP28-209ENST00000540925 XPO1O14980 1071 aaKnown RBP14.95□□□□□ -0.02
USP28-209ENST00000540925 LAMTOR5O43504 91 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 GABBR2O75899 941 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 NFATC1O95644 943 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 TBX18O95935 607 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 CYP17A1P05093 508 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 PSEN1P49768 467 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 BCAT1P54687 386 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 PDE4CQ08493 712 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 LRRC32Q14392 662 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 SMYD5Q6GMV2 418 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 PM20D1Q6GTS8 502 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 DPY19L2P1Q6NXN4 242 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 TRIM65Q6PJ69 517 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 Q6ZS52 159 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 SPEM1Q8N4L4 309 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
USP28-209ENST00000540925 PCDHB4Q9Y5E5 795 aa14.95□□□□□ -0.02
USP28-209ENST00000540925 SLC9A3R1O14745 358 aaPredicted RBP14.94□□□□□ -0.02
USP28-209ENST00000540925 OPRD1P41143 372 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 GALK1P51570 392 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 AMPD2Q01433 879 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 BST2Q10589 180 aaKnown RBP14.94□□□□□ -0.02
USP28-209ENST00000540925 CNGA2Q16280 664 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 MIIPQ5JXC2 388 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 RHBDF2Q6PJF5 856 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 SCML4Q8N228 414 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 RBBP8NLQ8NC74 664 aaPredicted RBP14.94□□□□□ -0.02
USP28-209ENST00000540925 ZBTB44Q8NCP5 570 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 SLC35F5Q8WV83 523 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 OTUB2Q96DC9 234 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 C2orf42Q9NWW7 574 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 DACH1Q9UI36 760 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 ZNF292O60281 2723 aa14.94□□□□□ -0.02
USP28-209ENST00000540925 RIF1Q5UIP0 2472 aaKnown RBP14.93□□□□□ -0.02
USP28-209ENST00000540925 DCHS1Q96JQ0 3298 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 PRR23AA6NEV1 266 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 LILRB5O75023 590 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 EGFP01133 1207 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 CALCAP01258 141 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 SETSIPP0DME0 302 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 CHRM1P11229 460 aaPredicted RBP14.93□□□□□ -0.02
USP28-209ENST00000540925 RARGP13631 454 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 CD19P15391 556 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 SLC9A1P19634 815 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 DRD1P21728 446 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 PON1P27169 355 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 ATP5C1P36542 298 aaKnown RBP14.93□□□□□ -0.02
USP28-209ENST00000540925 RPL34P49207 117 aaKnown RBP14.93□□□□□ -0.02
USP28-209ENST00000540925 DHCR24Q15392 516 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 STILQ15468 1287 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 MAN2A1Q16706 1144 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 HTR3DQ70Z44 454 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 ENOSF1Q7L5Y1 443 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 ASCL5Q7RTU5 278 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 TTC16Q8NEE8 873 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 P2RY13Q9BPV8 354 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 CRACR2AQ9BSW2 395 aa14.93□□□□□ -0.02
USP28-209ENST00000540925 SIX2Q9NPC8 291 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms