RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 DDX53Q86TM3 631 aaKnown RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 CD302Q8IX05 232 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 ACTRT1Q8TDG2 376 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 TFB1MQ8WVM0 346 aaKnown RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 CYTH2Q99418 400 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 FGFR1OP2Q9NVK5 253 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 CPSF2Q9P2I0 782 aaKnown RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 SFMBT1Q9UHJ3 866 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 PCDHGC5Q9Y5F6 944 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 STRCQ7RTU9 1775 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 FOXO6A8MYZ6 492 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 SOAT2O75908 522 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 MBL2P11226 248 aaPredicted RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 PECAM1P16284 738 aaPredicted RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 ATICP31939 592 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 PCK1P35558 622 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 CLCNKBP51801 687 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 ATXN1P54253 815 aaKnown RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 PTK7Q13308 1070 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 SLC39A4Q6P5W5 647 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 NLRP14Q86W24 1093 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 PPM1EQ8WY54 764 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 CRYBG1Q9Y4K1 1723 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 CFAP69A5D8W1 941 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 O00370 1275 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 PPP1R37O75864 691 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 ZFXP17010 805 aaPredicted RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 KRT4P19013 534 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 GRK4P32298 578 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 HARS2P49590 506 aaKnown RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 NRLP54845 237 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 IFI35P80217 286 aaPredicted RBP9.91□□□□□ -0.82
TTC39C-203ENST00000540918 COG7P83436 770 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 SH3PXD2AQ5TCZ1 1133 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 IFNL1Q8IU54 200 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 NDUFAF2Q8N183 169 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 B3GALNT2Q8NCR0 500 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 ELOVL4Q9GZR5 314 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 TKTL2Q9H0I9 626 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 CERS4Q9HA82 394 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 ENTPD7Q9NQZ7 604 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 SLC39A10Q9ULF5 831 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
TTC39C-203ENST00000540918 COL16A1Q07092 1604 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 RASSF10A6NK89 507 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 TRIM49D1C9J1S8 452 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 H0Y626 953 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 PJA2O43164 708 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 C22orf31O95567 290 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 LHX1P48742 406 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 NDUFV1P49821 464 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 ATXN3P54252 364 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 FKBP1BP68106 108 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 CAV1Q03135 178 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 MBTD1Q05BQ5 628 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 POU6F1Q14863 301 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 KCNT2Q6UVM3 1135 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 C16orf59Q7L2K0 433 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 EXD1Q8NHP7 514 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 RSPH1Q8WYR4 309 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 KCNK16Q96T55 309 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 TTYH3Q9C0H2 523 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 R3HDM2Q9Y2K5 976 aaKnown RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 GLI3P10071 1580 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 ZBTB24O43167 697 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 PSTPIP1O43586 416 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 CDH16O75309 829 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 RPSAP08865 295 aaKnown RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 ZBTB48P10074 688 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 PDK1Q15118 436 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 KLHL38Q2WGJ6 581 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 TAF1BQ53T94 588 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 ITPRIPL1Q6GPH6 555 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 RBM23Q86U06 439 aaKnown RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 PRELID2Q8N945 189 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 RHOBTB2Q9BYZ6 727 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 CNOT10Q9H9A5 744 aaKnown RBP9.9□□□□□ -0.82
TTC39C-203ENST00000540918 NPHS2Q9NP85 383 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 NT5MQ9NPB1 228 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 SH3BP1Q9Y3L3 701 aa9.9□□□□□ -0.82
TTC39C-203ENST00000540918 E5RI56 91 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 MSI1O43347 362 aaKnown RBP9.9□□□□□ -0.83
TTC39C-203ENST00000540918 SNAI1O95863 264 aaPredicted RBP9.9□□□□□ -0.83
TTC39C-203ENST00000540918 SLC6A3Q01959 620 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 CARNMT1Q8N4J0 409 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 C3orf20Q8ND61 904 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 DDI1Q8WTU0 396 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 PTPRN2Q92932 1015 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 LGMNQ99538 433 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 DCLK3Q9C098 648 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 PABPC3Q9H361 631 aaKnown RBP9.9□□□□□ -0.83
TTC39C-203ENST00000540918 LMCD1Q9NZU5 365 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 ZNF112Q9UJU3 913 aa9.9□□□□□ -0.83
TTC39C-203ENST00000540918 TULP2O00295 520 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms