RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 DAZAP2Q15038 168 aaPredicted RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 TRIP6Q15654 476 aaKnown RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 CLEC9AQ6UXN8 241 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 UNC13DQ70J99 1090 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 YAF2Q8IY57 180 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 TCEAL8Q8IYN2 117 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 MAFAQ8NHW3 353 aaPredicted RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 OSR1Q8TAX0 266 aaPredicted RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 NMD3Q96D46 503 aaKnown RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 TRIM5Q9C035 493 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 CHST8Q9H2A9 424 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 WDR26Q9H7D7 661 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 USP29Q9HBJ7 922 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 TUBA8Q9NY65 449 aaPredicted RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 PAXBP1Q9Y5B6 917 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 FRMPD2Q68DX3 1309 aaPredicted RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 CYP2D7A0A087X1C5 515 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 GOLGA6CA6NDK9 693 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 GOLGA6BA6NDN3 693 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 FCHO1O14526 889 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 SPRY2O43597 315 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 SNX2O60749 519 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 MOSPD3O75425 235 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 GOLGA6DP0CG33 693 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 ACVR2AP27037 513 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 PEX2P28328 305 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 CPT1AP50416 773 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 ZNF91Q05481 1191 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 GRM3Q14832 879 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 NPY5RQ15761 445 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 SHC4Q6S5L8 630 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 DCDC5Q6ZRR9 648 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 WDR75Q8IWA0 830 aaKnown RBP4.4□□□□□ -1.71
MDM2-227ENST00000540709 NGDNQ8NEJ9 315 aaKnown RBP4.4□□□□□ -1.71
MDM2-227ENST00000540709 CUL5Q93034 780 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 TSR2Q969E8 191 aaKnown RBP4.4□□□□□ -1.71
MDM2-227ENST00000540709 APIPQ96GX9 242 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
MDM2-227ENST00000540709 HIST1H2AAQ96QV6 131 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 APOL5Q9BWW9 433 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 GOLGA6AQ9NYA3 693 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 COL20A1Q9P218 1284 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 NKX1-2Q9UD57 310 aaPredicted RBP4.4□□□□□ -1.71
MDM2-227ENST00000540709 PCDHGB6Q9Y5F9 930 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 SNX13Q9Y5W8 968 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 FNDC1Q4ZHG4 1894 aaPredicted RBP4.4□□□□□ -1.71
MDM2-227ENST00000540709 FER1L4A9Z1Z3 1794 aa4.4□□□□□ -1.71
MDM2-227ENST00000540709 BTBD19C9JJ37 291 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 AGPSO00116 658 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 GOLIM4O00461 696 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 TPP1O14773 563 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 CCP110O43303 1012 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 TSPAN6O43657 245 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 TMPRSS11DO60235 418 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 BCAR3O75815 825 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 PARP1P09874 1014 aaKnown RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 CYP19A1P11511 503 aaPredicted RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 MYF5P13349 255 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 APEHP13798 732 aaKnown RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 ATP5F1P24539 256 aaPredicted RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 CARSP49589 748 aaKnown RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 CCT4P50991 539 aaKnown RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 KCNB1Q14721 858 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 POLD3Q15054 466 aaPredicted RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 ZNF750Q32MQ0 723 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 ZNF260Q3ZCT1 412 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 NXNQ6DKJ4 435 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 RANBP10Q6VN20 620 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 ZNF813Q6ZN06 617 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 C14orf80Q86SX3 495 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 SESTD1Q86VW0 696 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 P3H2Q8IVL5 708 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 METTL25Q8N6Q8 603 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 IPCEF1Q8WWN9 437 aaPredicted RBP4.39□□□□□ -1.71
MDM2-227ENST00000540709 VPS50Q96JG6 964 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 PI4KBQ9UBF8 816 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 ASAP1Q9ULH1 1129 aa4.39□□□□□ -1.71
MDM2-227ENST00000540709 CLIC1O00299 241 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 FRS3O43559 492 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 A1BGP04217 495 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 TXNP10599 105 aaKnown RBP4.38□□□□□ -1.71
MDM2-227ENST00000540709 CD19P15391 556 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 BTF3P20290 206 aaKnown RBP4.38□□□□□ -1.71
MDM2-227ENST00000540709 DEUP1Q05D60 604 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 MFSD13AQ14CX5 517 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 GFOD2Q3B7J2 385 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 SRGAP1Q7Z6B7 1085 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 FSTL5Q8N475 847 aaPredicted RBP4.38□□□□□ -1.71
MDM2-227ENST00000540709 CTHRC1Q96CG8 243 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 HMCESQ96FZ2 354 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 WDYHV1Q96HA8 205 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 ZNF212Q9UDV6 495 aa4.38□□□□□ -1.71
MDM2-227ENST00000540709 AQP7P3A6NL99 342 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 E5RJQ4 531 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 FYB1O15117 783 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 CA12O43570 354 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 INMTO95050 263 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 IL1R1P14778 569 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 ATF3P18847 181 aa4.37□□□□□ -1.71
MDM2-227ENST00000540709 HOXD9P28356 352 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms