RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 COX16Q9P0S2 106 aa9.99□□□□□ -0.81
PAAF1-209ENST00000540659 STK39Q9UEW8 545 aa9.99□□□□□ -0.81
PAAF1-209ENST00000540659 FAM153AQ9UHL3 310 aa9.99□□□□□ -0.81
PAAF1-209ENST00000540659 SNX24Q9Y343 169 aa9.99□□□□□ -0.81
PAAF1-209ENST00000540659 PTPRDP23468 1912 aa9.99□□□□□ -0.81
PAAF1-209ENST00000540659 VWA8A3KMH1 1905 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 C3orf70A6NLC5 250 aaPredicted RBP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 NT5C1B-RDH14C9J2C7 533 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 TRAPPC3O43617 180 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 DAB1O75553 588 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 TJP3O95049 919 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 ECEL1O95672 775 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 RAG1P15918 1043 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 TYMPP19971 482 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 PCK1P35558 622 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 PBX3P40426 434 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 CDKN2BP42772 138 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 RPL34P49207 117 aaKnown RBP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 FNTAP49354 379 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 CDH6P55285 790 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 COPS2P61201 443 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 FAM193AP78312 1265 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 MRPS5P82675 430 aaKnown RBP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 CBX1P83916 185 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 TSPY1Q01534 308 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 ADCY1Q08828 1119 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 KLF1Q13351 362 aaPredicted RBP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 SLC39A12Q504Y0 691 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 ZC3H12AQ5D1E8 599 aaKnown RBP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 TFDP3Q5H9I0 405 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 SLC26A9Q7LBE3 791 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 NPAS4Q8IUM7 802 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 SPATA2LQ8IUW3 424 aaPredicted RBP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 ZMIZ2Q8NF64 920 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 KCTD13Q8WZ19 329 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 BADQ92934 168 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 SMARCD1Q96GM5 515 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 B3GALT6Q96L58 329 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 TBCBQ99426 244 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 ERP44Q9BS26 406 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 CALN1Q9BXU9 219 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 MRPL9Q9BYD2 267 aaKnown RBP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 LRRC19Q9H756 370 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.98□□□□□ -0.81
PAAF1-209ENST00000540659 PCYOX1Q9UHG3 505 aa9.98□□□□□ -0.81
PAAF1-209ENST00000540659 BHMG1C9JSJ3 638 aaPredicted RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 MAP2K7O14733 419 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 CAPN9O14815 690 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 HSF2BPO75031 334 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 USP17L7P0C7H9 530 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 ECHS1P30084 290 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 SLC11A1P49279 550 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 ARPP19P56211 112 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 MMRN1Q13201 1228 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 CUL1Q13616 776 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 IKBKEQ14164 716 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 CCNG2Q16589 344 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 CA9Q16790 459 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 DUPD1Q68J44 220 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 FAM171BQ6P995 826 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 EMBQ6PCB8 327 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 HFE2Q6ZVN8 426 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 GSTA5Q7RTV2 222 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 PRUNE1Q86TP1 453 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 LRRTM3Q86VH5 581 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 TMEM199Q8N511 208 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 TSEN2Q8NCE0 465 aaKnown RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 GRK7Q8WTQ7 553 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 CAVIN3Q969G5 261 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 LBHD1Q9BQE6 289 aaPredicted RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 DDX23Q9BUQ8 820 aaKnown RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 SNRNP25Q9BV90 132 aaKnown RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 COLEC11Q9BWP8 271 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 MAK16Q9BXY0 300 aaKnown RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 OXCT2Q9BYC2 517 aaPredicted RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 ADAM33Q9BZ11 813 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 ACBD3Q9H3P7 528 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 TMEM30AQ9NV96 361 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 OGFRQ9NZT2 677 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 ADAM28Q9UKQ2 775 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 HPCAL4Q9UM19 191 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 FAN1Q9Y2M0 1017 aa9.97□□□□□ -0.81
PAAF1-209ENST00000540659 ZNF638Q14966 1978 aaKnown RBP9.97□□□□□ -0.81
PAAF1-209ENST00000540659 HHLA1C9JL84 531 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 TMEM189-UBE2V1I3L0A0 370 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 LIASO43766 372 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 CST8O60676 142 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 TIMP1P01033 207 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 CXCL10P02778 98 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 ALDH2P05091 517 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 BMP8BP34820 402 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 PTPN7P35236 360 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 SCNN1AP37088 669 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 GRIK1P39086 918 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 MATKP42679 507 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 PTPN9P43378 593 aa9.96□□□□□ -0.82
PAAF1-209ENST00000540659 RPL21P46778 160 aaKnown RBP9.96□□□□□ -0.82
PAAF1-209ENST00000540659 VPS41P49754 854 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms