RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 PEAR1Q5VY43 1037 aaPredicted RBP12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 TTC30AQ86WT1 665 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 FUKQ8N0W3 1084 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 SCAMP5Q8TAC9 235 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 RLN3Q8WXF3 142 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 NUSAP1Q9BXS6 441 aaKnown RBP12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 CSNK1G1Q9HCP0 422 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 DMAC2Q9NW81 257 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 STARD13Q9Y3M8 1113 aa12.72□□□□□ -0.37
CBX3P4-202ENST00000540428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 TCRBV21S2A2A0A5A6 115 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 TBC1D3BA6NDS4 549 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 GIPC1O14908 333 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 MAP3K13O43283 966 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 TULP3O75386 442 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 AP1G2O75843 785 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 CASP1P29466 404 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 CASP4P49662 377 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 CUL4BQ13620 913 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 ATL3Q6DD88 541 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 SLC23A3Q6PIS1 610 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 HTR3DQ70Z44 454 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 UNC93AQ86WB7 457 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 BBS7Q8IWZ6 715 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 TMEFF1Q8IYR6 380 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 CRYBG2Q8N1P7 616 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 ZNF513Q8N8E2 541 aaPredicted RBP12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 TAF4BQ92750 862 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 NACA2Q9H009 215 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 CCSER2Q9H7U1 834 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 KRT82Q9NSB4 513 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 GMIPQ9P107 970 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 MBD1Q9UIS9 605 aaPredicted RBP12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 WASF3Q9UPY6 502 aa12.71□□□□□ -0.37
CBX3P4-202ENST00000540428 ABCA7Q8IZY2 2146 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 AP5Z1O43299 807 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 TLR5O60602 858 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 CLSTN1O94985 981 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 VNN1O95497 513 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 PTGER3P43115 390 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 ANO4Q32M45 955 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 ZACNQ401N2 412 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 RESP18Q5W5W9 173 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 UNQ6494/PRO21346Q6UXR6 183 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 SCARA5Q6ZMJ2 495 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 RABEPKQ7Z6M1 372 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 TMEM25Q86YD3 366 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 PGBD3Q8N328 593 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 NAT16Q8N8M0 369 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 ZMIZ2Q8NF64 920 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 CEP76Q8TAP6 659 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 SMOQ99835 787 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 CYLDQ9NQC7 956 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 TLR8Q9NR97 1041 aaKnown RBP12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 MARK1Q9P0L2 795 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 PILRBQ9UKJ0 227 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 CIZ1Q9ULV3 898 aaPredicted RBP12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 PCDHA7Q9UN72 937 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 USP24Q9UPU5 2620 aa12.7□□□□□ -0.38
CBX3P4-202ENST00000540428 UPK3BL1B0FP48 263 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 UPK3BL2E5RIL1 263 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 PDXKO00764 312 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 IKBKBO14920 756 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 KLRC4O43908 158 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 GREM1O60565 184 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 ZNF217O75362 1048 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 SLFN14P0C7P3 912 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 HOXB2P14652 356 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 GABRG2P18507 467 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 NTSR1P30989 418 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 AFMP43652 599 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 ME1P48163 572 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 NDST1P52848 882 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 GOLGA8FQ08AF8 430 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 GOLGA8DPQ0D2H9 430 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 FOXC1Q12948 553 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 STK4Q13043 487 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 UAP1L1Q3KQV9 507 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 C10orf76Q5T2E6 689 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 KLHDC10Q6PID8 442 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 CEP57L1Q8IYX8 460 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 FRMD1Q8N878 549 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 KDF1Q8NAX2 398 aaPredicted RBP12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 KIAA0895Q8NCT3 520 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms