RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 KLF6Q99612 283 aaPredicted RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 STK33Q9BYT3 514 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 IL23AQ9NPF7 189 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 TRMT13Q9NUP7 481 aaKnown RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 TUBA8Q9NY65 449 aaPredicted RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 ERAP1Q9NZ08 941 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 A0A0J9YVX5 310 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 INHBAP08476 426 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 PABPC4LP0CB38 370 aaKnown RBP9.02□□□□□ -0.96
DDB1-217ENST00000540166 CDC16Q13042 620 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 RARS2Q5T160 578 aaKnown RBP9.02□□□□□ -0.96
DDB1-217ENST00000540166 FOXB2Q5VYV0 432 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 MAMDC4Q6UXC1 1216 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 PRPF39Q86UA1 669 aaKnown RBP9.02□□□□□ -0.96
DDB1-217ENST00000540166 HACE1Q8IYU2 909 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 PYROXD1Q8WU10 500 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 PYDC1Q8WXC3 89 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 PPP1R16BQ96T49 567 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 POP1Q99575 1024 aaKnown RBP9.02□□□□□ -0.96
DDB1-217ENST00000540166 EIF2AQ9BY44 585 aaKnown RBP9.02□□□□□ -0.96
DDB1-217ENST00000540166 TXLNGYQ9BZA5 131 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 INTS2Q9H0H0 1204 aaKnown RBP9.02□□□□□ -0.96
DDB1-217ENST00000540166 EBF3Q9H4W6 596 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 PSMC3IPQ9P2W1 217 aaPredicted RBP9.02□□□□□ -0.96
DDB1-217ENST00000540166 LNPEPQ9UIQ6 1025 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 APPL1Q9UKG1 709 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 ZNF510Q9Y2H8 683 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 STK24Q9Y6E0 443 aa9.02□□□□□ -0.96
DDB1-217ENST00000540166 ADGRA3Q8IWK6 1321 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 K7ENM7 598 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 CBFA2T3O75081 653 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 PFKMP08237 780 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 UQCRBP14927 111 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 SELPP16109 830 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 CHKAP35790 457 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 PRKCIP41743 596 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 FMO5P49326 533 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 MPP2Q14168 576 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 KAZNQ674X7 775 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 NET1Q7Z628 596 aaPredicted RBP9.02□□□□□ -0.97
DDB1-217ENST00000540166 SLFN11Q7Z7L1 901 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 CRLF3Q8IUI8 442 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 TRPV1Q8NER1 839 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 GIPC3Q8TF64 312 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 ATG4AQ8WYN0 398 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 CCT7Q99832 543 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 PDLIM7Q9NR12 457 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 FBXO6Q9NRD1 293 aaPredicted RBP9.02□□□□□ -0.97
DDB1-217ENST00000540166 RRN3P2A6NIE6 340 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 CCR3P51677 355 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 STAT5BP51692 787 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
DDB1-217ENST00000540166 NOP14P78316 857 aaKnown RBP9.02□□□□□ -0.97
DDB1-217ENST00000540166 CDK16Q00536 496 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 KCNA1Q09470 495 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 EFHC1Q5JVL4 640 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 ATG16L1Q676U5 607 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 DDHD1Q8NEL9 900 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 GCNAQ96QF7 691 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 PRPF18Q99633 342 aaKnown RBP9.02□□□□□ -0.97
DDB1-217ENST00000540166 NUP85Q9BW27 656 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 NDEL1Q9GZM8 345 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 CCDC68Q9H2F9 335 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 KCTD10Q9H3F6 313 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 TAS2R1Q9NYW7 299 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 SLC9A2Q9UBY0 812 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 ROBO3Q96MS0 1386 aa9.02□□□□□ -0.97
DDB1-217ENST00000540166 DDX3YO15523 660 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 KDM1AO60341 852 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 ATF7P17544 494 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 VCLP18206 1134 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 AMPD1P23109 780 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 GCLMP48507 274 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 PABPC1LQ4VXU2 614 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 CYP4X1Q8N118 509 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 TAB3Q8N5C8 712 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 USP6NLQ92738 828 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 SLC35C1Q96A29 364 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 ARHGEF26Q96DR7 871 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 AGPAT1Q99943 283 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 EPB41L4BQ9H329 900 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 AAASQ9NRG9 546 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 UTP6Q9NYH9 597 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 F8W8V4 182 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 DLL1O00548 723 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 XPO1O14980 1071 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 OR6B1O95007 311 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 PSAPP07602 524 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 RPA1P27694 616 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 EIF2B2P49770 351 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 NAA20P61599 178 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 ZNF200P98182 395 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 PSMD6Q15008 389 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 EPHA7Q15375 998 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 LGSNQ5TDP6 509 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 TMEM110Q86TL2 294 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms