RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 IRF1P10914 325 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 ADORA2BP29275 332 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 HOXC13P31276 330 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 TIE1P35590 1138 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 PSMC2P35998 433 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 ATP5C1P36542 298 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 DPP6P42658 865 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 DLG4P78352 724 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 ENPEPQ07075 957 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 CCDC6Q16204 474 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 NFIL3Q16649 462 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 LY6G5CQ5SRR4 150 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 STPG1Q5TH74 334 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 SDE2Q6IQ49 451 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 RHBDF2Q6PJF5 856 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 CYP2U1Q7Z449 544 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 PGBD3Q8N328 593 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 TXNDC5Q8NBS9 432 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 KCNV2Q8TDN2 545 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 XPO6Q96QU8 1125 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 CDK5RAP1Q96SZ6 601 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 DUSP9Q99956 384 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 NIF3L1Q9GZT8 377 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 CCSER2Q9H7U1 834 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 PNPLA8Q9NP80 782 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 TMEM30AQ9NV96 361 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 POLR3BQ9NW08 1133 aaPredicted RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 IL37Q9NZH6 218 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 HPSEQ9Y251 543 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 PCDHA5Q9Y5H7 936 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 HELZP42694 1942 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 PTPRDP23468 1912 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 FAM92AA1XBS5 289 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 TNFRSF10BO14763 440 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 KHNYNO15037 678 aaKnown RBP16.16■□□□□ 0.18
UBE3B-211ENST00000539843 HOXC11O43248 304 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-211ENST00000539843 KLF8O95600 359 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-211ENST00000539843 ASPAP45381 313 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 PSEN1P49768 467 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 SLC8A3P57103 927 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 PLA2G2CQ5R387 149 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 DAB2IPQ5VWQ8 1189 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 RASSF3Q86WH2 238 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 GUF1Q8N442 669 aaKnown RBP16.16■□□□□ 0.18
UBE3B-211ENST00000539843 ALLCQ8N6M5 410 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 SMOQ99835 787 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 EDEM2Q9BV94 578 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 SDCBP2Q9H190 292 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 MMRN2Q9H8L6 949 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 CSNK1G1Q9HCP0 422 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 WDR87Q6ZQQ6 2873 aa16.16■□□□□ 0.18
UBE3B-211ENST00000539843 ANAPC1Q9H1A4 1944 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 A0A1W2PQ27 194 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 A0A1W2PQ64 194 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 A0A1W2PQD8 194 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 BCLAF3A2AJT9 711 aaKnown RBP16.15■□□□□ 0.18
UBE3B-211ENST00000539843 GOLGA6L4A6NEF3 574 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 DCLK1O15075 740 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 ZDHHC11BP0C7U3 371 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 RALAP11233 206 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 ACO1P21399 889 aaKnown RBP16.15■□□□□ 0.18
UBE3B-211ENST00000539843 GTF2H1P32780 548 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 SLC6A11P48066 632 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 GCLMP48507 274 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 DHPSP49366 369 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-211ENST00000539843 NDUFA8P51970 172 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 ORC1Q13415 861 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 ADAM9Q13443 819 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 PMS2CLQ68D20 193 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 KRT39Q6A163 491 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 GRAMD4Q6IC98 578 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 SPOPLQ6IQ16 392 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 PAQR9Q6ZVX9 377 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 LPCAT2Q7L5N7 544 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 BBS7Q8IWZ6 715 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 ZNF513Q8N8E2 541 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-211ENST00000539843 IL17RCQ8NAC3 791 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 MDGA1Q8NFP4 955 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 JAKMIP2Q96AA8 810 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 CYFIP2Q96F07 1278 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 HNRNPABQ99729 332 aaKnown RBP16.15■□□□□ 0.18
UBE3B-211ENST00000539843 TMEM8AQ9HCN3 771 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 SPHK2Q9NRA0 654 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 WDR35Q9P2L0 1181 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 SCML2Q9UQR0 700 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
UBE3B-211ENST00000539843 DCHS1Q96JQ0 3298 aa16.14■□□□□ 0.18
UBE3B-211ENST00000539843 TRIM49P0CI25 452 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 TRIM49CP0CI26 452 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 EPB41P11171 864 aaKnown RBP16.14■□□□□ 0.17
UBE3B-211ENST00000539843 CD58P19256 250 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 DPYDQ12882 1025 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 GAB4Q2WGN9 574 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 C10orf76Q5T2E6 689 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 NAT16Q8N8M0 369 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
UBE3B-211ENST00000539843 HMGB4Q8WW32 186 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms