RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 OLIG1Q8TAK6 271 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 CCHCR1Q8TD31 782 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 MICAL1Q8TDZ2 1067 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 GRK7Q8WTQ7 553 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 RABGGTAQ92696 567 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 HAUS1Q96CS2 278 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 TRMT2BQ96GJ1 504 aaKnown RBP12.33□□□□□ -0.44
VTN-202ENST00000539746 SLC2A13Q96QE2 648 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 SMOQ99835 787 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
VTN-202ENST00000539746 NACA2Q9H009 215 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 ZWILCHQ9H900 591 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 HAUS2Q9NVX0 235 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 TRIM10Q9UDY6 481 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 TMEM59LQ9UK28 342 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 SCN1AP35498 2009 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.32□□□□□ -0.44
VTN-202ENST00000539746 TCRBV5S1A1TA0A578 114 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 TMEM110-MUSTN1A8MSY1 372 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 NT5C1B-RDH14C9J2C7 533 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
VTN-202ENST00000539746 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
VTN-202ENST00000539746 CXCL14O95715 111 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 POU2F2P09086 479 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 HNRNPA1P09651 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
VTN-202ENST00000539746 KLRC2P26717 231 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 HOXA9P31269 272 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 PTPN7P35236 360 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 RFC1P35251 1148 aaPredicted RBP12.32□□□□□ -0.44
VTN-202ENST00000539746 ARL4AP40617 200 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 YWHAGP61981 247 aaKnown RBP eCLIP12.32□□□□□ -0.44
VTN-202ENST00000539746 ADCY1Q08828 1119 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 KLHDC10Q6PID8 442 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 CCDC50Q8IVM0 306 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 KLHL23Q8NBE8 558 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.32□□□□□ -0.44
VTN-202ENST00000539746 RXFP2Q8WXD0 754 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 UBXN4Q92575 508 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 FBXO32Q969P5 355 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 VWCEQ96DN2 955 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 DDX50Q9BQ39 737 aaKnown RBP12.32□□□□□ -0.44
VTN-202ENST00000539746 TCF25Q9BQ70 676 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 TLR10Q9BXR5 811 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 SLC28A3Q9HAS3 691 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 CYP4F11Q9HBI6 524 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 STIM2Q9P246 746 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 RASAL2Q9UJF2 1139 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 COG5Q9UP83 839 aa12.32□□□□□ -0.44
VTN-202ENST00000539746 FNDC1Q4ZHG4 1894 aaPredicted RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 TRIP11Q15643 1979 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 CLDN5O00501 218 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 NCK2O43639 380 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 CEP104O60308 925 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 APOEP02649 317 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 NCAM1P13591 858 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 CYP2F1P24903 491 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 DDX6P26196 483 aaKnown RBP eCLIP12.31□□□□□ -0.44
VTN-202ENST00000539746 CDC25CP30307 473 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 CCR1P32246 355 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 RNASE9P60153 205 aaKnown RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 ERVK-21P61565 698 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 KRT81Q14533 505 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 DCAF6Q58WW2 860 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 PAQR9Q6ZVX9 377 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 ZNF572Q7Z3I7 529 aaPredicted RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
VTN-202ENST00000539746 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 MRPL43Q8N983 215 aaKnown RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 FAM172AQ8WUF8 416 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 RNF34Q969K3 372 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 NTAN1Q96AB6 310 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 ZNF512Q96ME7 567 aaPredicted RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 TTLL2Q9BWV7 592 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 ULBP1Q9BZM6 244 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 ARGLU1Q9NWB6 273 aaPredicted RBP12.31□□□□□ -0.44
VTN-202ENST00000539746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.31□□□□□ -0.44
VTN-202ENST00000539746 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 USP18Q9UMW8 372 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 USTQ9Y2C2 406 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 RAD54BQ9Y620 910 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 SCN5AQ14524 2016 aa12.31□□□□□ -0.44
VTN-202ENST00000539746 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 H3BNC9 293 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 C2CD2LO14523 706 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 ENC1O14682 589 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 B4GALT3O60512 393 aa12.3□□□□□ -0.44
VTN-202ENST00000539746 CFHP08603 1231 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms