RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ACAD9Q9H845 621 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 SIRPGQ9P1W8 387 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 PAK5Q9P286 719 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 ARMCX1Q9P291 453 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 ANGPTL2Q9UKU9 493 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 SCAF8Q9UPN6 1271 aaKnown RBP10.06□□□□□ -0.8
CDH13-204ENST00000539548 B4GALT4O60513 344 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 RFPL1O75677 317 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 MAGEA6P43360 314 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 BST1Q10588 318 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 TNFAIP1Q13829 316 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 TBCCQ15814 346 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 NBPF20Q3BBV1 942 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 THEMIS2Q5TEJ8 643 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 SLC30A9Q6PML9 568 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 ZC3H18Q86VM9 953 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 SCUBE1Q8IWY4 988 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 TTLL6Q8N841 843 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 MTBPQ96DY7 904 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 FAM161BQ96MY7 647 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 PCYT2Q99447 389 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 ZNF184Q99676 751 aaPredicted RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 WWP1Q9H0M0 922 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 KRT82Q9NSB4 513 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 PPARGC1AQ9UBK2 798 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 DNAJB4Q9UDY4 337 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 TAGLN3Q9UI15 199 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 PLA2G4CQ9UP65 541 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 MGAMO43451 1857 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 CXorf49A8MYA2 514 aaPredicted RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 H7C0C1 242 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 BIRC5O15392 142 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 TM7SF2O76062 418 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 ENO1P06733 434 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 AMPD1P23109 780 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 ATP5OP48047 213 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 PAPOLAP51003 745 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 ZNF143P52747 638 aaPredicted RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 CDH6P55285 790 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 MRPS5P82675 430 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 TMPRSS15P98073 1019 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 CNTN2Q02246 1040 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 CXCL9Q07325 125 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 GSTA3Q16772 222 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 TRMT5Q32P41 509 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 TEX44Q53QW1 395 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 C6orf163Q5TEZ5 329 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 IER5Q5VY09 327 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 CYP4V2Q6ZWL3 525 aaPredicted RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 MYLK4Q86YV6 388 aaPredicted RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 NUDCD3Q8IVD9 361 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 CTAGE3PQ8IX95 158 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 NIM1KQ8IY84 436 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 RBM15BQ8NDT2 890 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 LRRC39Q96DD0 335 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 ANKRD36BP1Q96IX9 119 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 RNF157Q96PX1 679 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 NR1H4Q96RI1 486 aaPredicted RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 PEBP4Q96S96 227 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 CNPY3Q9BT09 278 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 CCDC106Q9BWC9 280 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 TEX13BQ9BXU2 312 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 PLAC1Q9HBJ0 212 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 POPDC2Q9HBU9 364 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 PAPOLBQ9NRJ5 636 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 RAB6BQ9NRW1 208 aa10.05□□□□□ -0.8
CDH13-204ENST00000539548 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 ZC3H7BQ9UGR2 993 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.05□□□□□ -0.8
CDH13-204ENST00000539548 SPECC1L-ADORA2AF8WAN1 911 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 H3BRJ5 948 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 SNNO75324 88 aaPredicted RBP10.04□□□□□ -0.8
CDH13-204ENST00000539548 KRT38O76015 456 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 PRKCBP05771 671 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 GNAT1P11488 350 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ANPEPP15144 967 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 OSBPP22059 807 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CRHR1P34998 444 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 HIRAP54198 1017 aaPredicted RBP10.04□□□□□ -0.8
CDH13-204ENST00000539548 ACTR3P61158 418 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 DNAL1Q4LDG9 190 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ZNF667Q5HYK9 610 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 FAM160B1Q5W0V3 765 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CES4AQ5XG92 561 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CAND1Q86VP6 1230 aaKnown RBP10.04□□□□□ -0.8
CDH13-204ENST00000539548 ARID3BQ8IVW6 561 aaPredicted RBP10.04□□□□□ -0.8
CDH13-204ENST00000539548 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 MCUQ8NE86 351 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 DNERQ8NFT8 737 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 FBXO27Q8NI29 283 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ZFAND2BQ8WV99 257 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 C12orf42Q96LP6 360 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 TRAPPC9Q96Q05 1148 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ADPGKQ9BRR6 497 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 MECRQ9BV79 373 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms