RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 TRIM68Q6AZZ1 485 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 PM20D1Q6GTS8 502 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 CELF5Q8N6W0 485 aaKnown RBP16.57■□□□□ 0.24
RPAIN-206ENST00000539417 NEK11Q8NG66 645 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 TTC8Q8TAM2 541 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 SH3RF2Q8TEC5 729 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 LRRC4Q9HBW1 653 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 TLR8Q9NR97 1041 aaKnown RBP16.57■□□□□ 0.24
RPAIN-206ENST00000539417 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 YJEFN3A6XGL0 299 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 E7ENQ6 273 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 LEFTY2O00292 366 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 TLR5O60602 858 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 CAVIN2O95810 425 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 ZBED1O96006 694 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 MBL2P11226 248 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-206ENST00000539417 RARGP13631 454 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 CYP11B1P15538 503 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 RFX1P22670 979 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 RPL34P49207 117 aaKnown RBP16.56■□□□□ 0.24
RPAIN-206ENST00000539417 SLC8A3P57103 927 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 ZNF445P59923 1031 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 SLC7A9P82251 487 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 PTK2Q05397 1052 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 USP4Q13107 963 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 ZNF268Q14587 947 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-206ENST00000539417 SIX5Q8N196 739 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 SLC20A1Q8WUM9 679 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 DEPDC1BQ8WUY9 529 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 BRD9Q9H8M2 597 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 HEBP1Q9NRV9 189 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.56■□□□□ 0.24
RPAIN-206ENST00000539417 OBP2AQ9NY56 170 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 NAGPAQ9UK23 515 aa16.56■□□□□ 0.24
RPAIN-206ENST00000539417 OTOL1A6NHN0 477 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-206ENST00000539417 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 MED7O43513 233 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 CHRNB2P17787 502 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 SOX5P35711 763 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 DAOAP59103 153 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 YWHAGP61981 247 aaKnown RBP eCLIP16.55■□□□□ 0.24
RPAIN-206ENST00000539417 C1orf131Q8NDD1 294 aaKnown RBP16.55■□□□□ 0.24
RPAIN-206ENST00000539417 EPS8L1Q8TE68 723 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 PIWIL1Q96J94 861 aaKnown RBP16.55■□□□□ 0.24
RPAIN-206ENST00000539417 SLC4A5Q9BY07 1137 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 MIS12Q9H081 205 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 LINC00597Q9H2U6 94 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 CYLDQ9NQC7 956 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 GTSE1Q9NYZ3 720 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 ZMYM5Q9UJ78 669 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 FBXL21Q9UKT6 434 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 PCDHGC3Q9UN70 934 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 WNT6Q9Y6F9 365 aa16.55■□□□□ 0.24
RPAIN-206ENST00000539417 E5RJQ4 531 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 ZNF263O14978 683 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 CHADO15335 359 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 MMEP08473 750 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 ARSAP15289 507 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 CD72P21854 359 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 PBX1P40424 430 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 SOX9P48436 509 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 MTF1Q14872 753 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 FILIP1LQ4L180 1135 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 SLC44A4Q53GD3 710 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 SIX6OS1Q8N1H7 587 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 BAP1Q92560 729 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 EDEM1Q92611 657 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 E2F7Q96AV8 911 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 CPXM1Q96SM3 734 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 FAM83CQ9BQN1 747 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 LRFN3Q9BTN0 628 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 HPS4Q9NQG7 708 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 ST7Q9NRC1 585 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 CFAP97Q9P2B7 532 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 WNT16Q9UBV4 365 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 NOCTQ9UK39 431 aaKnown RBP16.54■□□□□ 0.24
RPAIN-206ENST00000539417 PAPSS1O43252 624 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-206ENST00000539417 GPR37L1O60883 481 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 IRF1P10914 325 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 PFKLP17858 780 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 TUBP50607 506 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 UBASH3AP57075 661 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 ARID5AQ03989 594 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 PDCLQ13371 301 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 E4F1Q66K89 784 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-206ENST00000539417 CWF19L1Q69YN2 538 aaKnown RBP16.54■□□□□ 0.24
RPAIN-206ENST00000539417 YAF2Q8IY57 180 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 HSFY1Q96LI6 401 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 SPAG5Q96R06 1193 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 KLF16Q9BXK1 252 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-206ENST00000539417 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 EBF3Q9H4W6 596 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 KIF9Q9HAQ2 790 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 ARHGEF3Q9NR81 526 aa16.54■□□□□ 0.24
RPAIN-206ENST00000539417 WDFY4Q6ZS81 3184 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 A0A1W2PQC6 194 aa16.53■□□□□ 0.24
RPAIN-206ENST00000539417 AP5Z1O43299 807 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms