RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 KRT73Q86Y46 540 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 ANKRD18AQ8IVF6 992 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 CPOQ8IVL8 374 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 FTSJ3Q8IY81 847 aaKnown RBP3.63□□□□□ -1.83
SNHG1-210ENST00000539303 COLGALT2Q8IYK4 626 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 FSTL5Q8N475 847 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-210ENST00000539303 B3GALNT2Q8NCR0 500 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 TOR1AIP2Q8NFQ8 470 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 MBD3L2Q8NHZ7 208 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-210ENST00000539303 SLC25A43Q8WUT9 341 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-210ENST00000539303 AFG1LQ8WV93 481 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 ASB12Q8WXK4 309 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 PTCD3Q96EY7 689 aaKnown RBP3.63□□□□□ -1.83
SNHG1-210ENST00000539303 MYEOVQ96EZ4 313 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 WDYHV1Q96HA8 205 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 MECRQ9BV79 373 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 MLST8Q9BVC4 326 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 VN1R3Q9BXE9 311 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 TMX4Q9H1E5 349 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-210ENST00000539303 VPS16Q9H269 839 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 SLC2A4RGQ9NR83 387 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 TMOD4Q9NZQ9 345 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 RAPGEFL1Q9UHV5 662 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 POLR2AP24928 1970 aaKnown RBP3.63□□□□□ -1.83
SNHG1-210ENST00000539303 ADGRA2Q96PE1 1338 aa3.63□□□□□ -1.83
SNHG1-210ENST00000539303 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 A1L4Q6 167 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 TMEM200CA6NKL6 621 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 H0Y3Z8 333 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 M0QYT0 321 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 M0QZQ0 153 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 IRAK2O43187 625 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 FAM155BO75949 473 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CHRM2P08172 466 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CYP21A2P08686 494 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 ITGAMP11215 1152 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 DRD1P21728 446 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 ITPKBP27987 946 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CST5P28325 142 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 EPHA3P29320 983 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 ADD2P35612 726 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 BMPR1AP36894 532 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 MAGEA10P43363 369 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 FAM3BP58499 235 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 TIRAPP58753 221 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 FSTL1Q12841 308 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 MTAPQ13126 283 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 TBCCQ15814 346 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CYP1B1Q16678 543 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 TRIM71Q2Q1W2 868 aaKnown RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 SLC4A8Q2Y0W8 1093 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 P3H1Q32P28 736 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 TREML2Q5T2D2 321 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CCDC70Q6NSX1 233 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 MZT2AQ6P582 158 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 RASGRP2Q7LDG7 609 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 C2CD5Q86YS7 1000 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 HERC6Q8IVU3 1022 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CCDC117Q8IWD4 279 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 NME8Q8N427 588 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CACTINQ8WUQ7 758 aaKnown RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 FKBP10Q96AY3 582 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 ZDHHC12Q96GR4 267 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 PRR11Q96HE9 360 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 ZNF668Q96K58 619 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 PLEKHG4BQ96PX9 1271 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 SENP7Q9BQF6 1050 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 DDX23Q9BUQ8 820 aaKnown RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 TAF1DQ9H5J8 278 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 GLOD4Q9HC38 313 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 HELLSQ9NRZ9 838 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 PARPBPQ9NWS1 579 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 KIF17Q9P2E2 1029 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 IFT80Q9P2H3 777 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 KCND3Q9UK17 655 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 FBXO9Q9UK97 447 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 ASAP1Q9ULH1 1129 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CA14Q9ULX7 337 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 USP22Q9UPT9 525 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 PCDHB7Q9Y5E2 793 aa3.62□□□□□ -1.83
SNHG1-210ENST00000539303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.62□□□□□ -1.832e-26■□□□□ 8.9
SNHG1-210ENST00000539303 LRRFIP2Q9Y608 721 aaKnown RBP3.62□□□□□ -1.83
SNHG1-210ENST00000539303 CA12O43570 354 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 SPRY2O43597 315 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 SNX2O60749 519 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 KRT38O76015 456 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 WDR47O94967 919 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 IL6RP08887 468 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ALADP13716 330 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ZNF20P17024 532 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 LAG3P18627 525 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 RXRAP19793 462 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 PCSK6P29122 969 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 MCM5P33992 734 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 MTHFSP49914 203 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 GUCY1B3Q02153 619 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 DEUP1Q05D60 604 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ACOX1Q15067 660 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 FAM110CQ1W6H9 321 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 GALNTL6Q49A17 601 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms