RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 FAM71DQ8N9W8 422 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 TTC8Q8TAM2 541 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 RAB3IL1Q8TBN0 382 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 APBB2Q92870 758 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 THOC1Q96FV9 657 aaKnown RBP7.23□□□□□ -1.25
PROM1-219ENST00000539194 ZNF333Q96JL9 665 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 RAB3IPQ96QF0 476 aaPredicted RBP7.23□□□□□ -1.25
PROM1-219ENST00000539194 NRBP2Q9NSY0 501 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 TAS2R1Q9NYW7 299 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 ASB3Q9Y575 518 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 RBM47A0AV96 593 aaKnown RBP7.23□□□□□ -1.25
PROM1-219ENST00000539194 LACTBL1A8MY62 500 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 GOLGA8SH3BPF8 625 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 GOLGA8MH3BSY2 632 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 AVILO75366 819 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 GCATO75600 419 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 CXCL8P10145 99 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 CHRM1P11229 460 aaPredicted RBP7.23□□□□□ -1.25
PROM1-219ENST00000539194 FAAP100Q0VG06 881 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 ZNF394Q53GI3 561 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 JADE1Q6IE81 842 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 KLHDC8BQ8IXV7 354 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 PYROXD1Q8WU10 500 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 FAM167AQ96KS9 214 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 BTBD10Q9BSF8 475 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 C2orf40Q9H1Z8 148 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 TCEAL9Q9UHQ7 104 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 CENPFP49454 3210 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 MAP3K13O43283 966 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 DGKIO75912 1065 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 GSTA2P09210 222 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 ATP6V1C1P21283 382 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 ARRB2P32121 409 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 SLC26A2P50443 739 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 HDAC4P56524 1084 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 ACSBG2Q5FVE4 666 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 RABGAP1LQ5R372 815 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 MARCH8Q5T0T0 291 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 FAM183BPQ6ZVS7 135 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 TRIM50Q86XT4 487 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 TREML1Q86YW5 311 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 APOBEC3FQ8IUX4 373 aaKnown RBP7.23□□□□□ -1.25
PROM1-219ENST00000539194 ADGRF2Q8IZF7 708 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 FBXO27Q8NI29 283 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 NT5C3BQ969T7 300 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 EMID1Q96A84 441 aaPredicted RBP7.23□□□□□ -1.25
PROM1-219ENST00000539194 CNPY3Q9BT09 278 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 SPATC1LQ9H0A9 340 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 C1orf21Q9H246 121 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 HESX1Q9UBX0 185 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 SUFUQ9UMX1 484 aa7.23□□□□□ -1.25
PROM1-219ENST00000539194 MED7O43513 233 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 ENTPD5O75356 428 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 TGM2P21980 687 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 RDXP35241 583 aaKnown RBP7.22□□□□□ -1.25
PROM1-219ENST00000539194 PTDSS1P48651 473 aaKnown RBP7.22□□□□□ -1.25
PROM1-219ENST00000539194 EIF3EP60228 445 aaKnown RBP7.22□□□□□ -1.25
PROM1-219ENST00000539194 PSMC1P62191 440 aaKnown RBP7.22□□□□□ -1.25
PROM1-219ENST00000539194 VGLL4Q14135 290 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 DPYSL2Q16555 572 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 CA9Q16790 459 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 MAVSQ7Z434 540 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 ZBTB33Q86T24 672 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 LONP2Q86WA8 852 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 TTC30AQ86WT1 665 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 RNF149Q8NC42 400 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 LRRC8CQ8TDW0 803 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 WDR60Q8WVS4 1066 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 ARNTL2Q8WYA1 636 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 LRRC39Q96DD0 335 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 ZBTB10Q96DT7 871 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 CYTH2Q99418 400 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 FRMD8Q9BZ67 464 aaPredicted RBP7.22□□□□□ -1.25
PROM1-219ENST00000539194 ASB7Q9H672 318 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 PCDH18Q9HCL0 1135 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 TXNRD2Q9NNW7 524 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 NPHS2Q9NP85 383 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 NPTXRO95502 500 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 CSH1P0DML2 217 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 CSH2P0DML3 217 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 RBP3P10745 1247 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 MCF2P10911 925 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 VDRP11473 427 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 TFE3P19532 575 aaPredicted RBP7.22□□□□□ -1.25
PROM1-219ENST00000539194 TPSB2P20231 275 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 PHBP35232 272 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 SCNN1AP37088 669 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 NUMBP49757 651 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 TUBP50607 506 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 SP4Q02446 784 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 TPSAB1Q15661 275 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 DBN1Q16643 649 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 FAM47CQ5HY64 1035 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 PRAMEF18Q5VWM3 479 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 FAM160B1Q5W0V3 765 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 TTC7BQ86TV6 843 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 SPATA18Q8TC71 538 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 NAF1Q96HR8 494 aaKnown RBP7.22□□□□□ -1.25
PROM1-219ENST00000539194 ZNF670Q9BS34 389 aa7.22□□□□□ -1.25
PROM1-219ENST00000539194 RNPEPQ9H4A4 650 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms