RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 KRT81Q14533 505 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 FASTKD3Q14CZ7 662 aaKnown RBP14.76□□□□□ -0.05
ACTN1-205ENST00000538545 RHBDF2Q6PJF5 856 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 LRRTM3Q86VH5 581 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 EIF1ADQ8N9N8 165 aaKnown RBP14.76□□□□□ -0.05
ACTN1-205ENST00000538545 FAM71DQ8N9W8 422 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 FAM76AQ8TAV0 307 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 SLCO2A1Q92959 643 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 HNRNPABQ99729 332 aaKnown RBP14.76□□□□□ -0.05
ACTN1-205ENST00000538545 DHX35Q9H5Z1 703 aaKnown RBP14.76□□□□□ -0.05
ACTN1-205ENST00000538545 SLC38A7Q9NVC3 462 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 NAALADL1Q9UQQ1 740 aa14.76□□□□□ -0.05
ACTN1-205ENST00000538545 CAND2O75155 1236 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 USP17L7P0C7H9 530 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 BDNFP23560 247 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 TKTL1P51854 596 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 VCPP55072 806 aaKnown RBP14.75□□□□□ -0.05
ACTN1-205ENST00000538545 NME3Q13232 169 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 MRPL10Q7Z7H8 261 aaKnown RBP14.75□□□□□ -0.05
ACTN1-205ENST00000538545 RPAINQ86UA6 219 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 OR10T2Q8NGX3 314 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 SPATA18Q8TC71 538 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 ULBP1Q9BZM6 244 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 MTRF1LQ9UGC7 380 aaKnown RBP14.75□□□□□ -0.05
ACTN1-205ENST00000538545 CAPN2P17655 700 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 CLLU1OSQ5K130 101 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 FAM35AQ86V20 835 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 HACE1Q8IYU2 909 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 ALLCQ8N6M5 410 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 SLC35B2Q8TB61 432 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 GRK7Q8WTQ7 553 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 EDEM1Q92611 657 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 PABPC3Q9H361 631 aaKnown RBP14.75□□□□□ -0.05
ACTN1-205ENST00000538545 NOVA2Q9UNW9 492 aaKnown RBP14.75□□□□□ -0.05
ACTN1-205ENST00000538545 SCN5AQ14524 2016 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 NUP205Q92621 2012 aa14.75□□□□□ -0.05
ACTN1-205ENST00000538545 TCRBV7S3A2A0A539 114 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 YJEFN3A6XGL0 299 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 E7ENQ6 273 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 F5H423 210 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 PCK1P35558 622 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 TCTN1Q2MV58 587 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 CCDC38Q502W7 563 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 ANKRD22Q5VYY1 191 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 BBS12Q6ZW61 710 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 ZNF784Q8NCA9 323 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 PCDH19Q8TAB3 1148 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 LRRC4Q9HBW1 653 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 TMBIM4Q9HC24 238 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 ETNK2Q9NVF9 386 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 CTNNAL1Q9UBT7 734 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 RANBP2P49792 3224 aaKnown RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 XPO1O14980 1071 aaKnown RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 RIPK2O43353 540 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 ZNF623O75123 536 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 RBP3P10745 1247 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 GPNMBQ14956 572 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 LONRF1Q17RB8 773 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 SLC26A9Q7LBE3 791 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 PQLC3Q8N755 202 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.74□□□□□ -0.052e-6■■■■■ 54.4
ACTN1-205ENST00000538545 SCLYQ96I15 445 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 PCDH18Q9HCL0 1135 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 GOLGA8KD6RF30 607 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 MYZAPP0CAP1 466 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 FAM200BP0CF97 657 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 SETSIPP0DME0 302 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 SULT1E1P49888 294 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 EIF3EP60228 445 aaKnown RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 COPS2P61201 443 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 GUCY1A3Q02108 690 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 FAXCQ5TGI0 409 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 SDHAF4Q5VUM1 108 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 OTUD1Q5VV17 481 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 DENND2CQ68D51 928 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 ZNF598Q86UK7 904 aaKnown RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 PXYLP1Q8TE99 480 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 MYLPFQ96A32 169 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 ATP6V1G3Q96LB4 118 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 DEFB118Q96PH6 123 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 MAK16Q9BXY0 300 aaKnown RBP14.74□□□□□ -0.05
ACTN1-205ENST00000538545 ANLNQ9NQW6 1124 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 WHRNQ9P202 907 aa14.74□□□□□ -0.05
ACTN1-205ENST00000538545 PQBP1O60828 265 aaKnown RBP14.73□□□□□ -0.05
ACTN1-205ENST00000538545 NBNO60934 754 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 FYNP06241 537 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 PGFP49763 221 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 TP53INP2Q8IXH6 220 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 PLD5Q8N7P1 536 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 CCDC89Q8N998 374 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 DBF4BQ8NFT6 615 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 SCAMP5Q8TAC9 235 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 NUDT5Q9UKK9 219 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 C9IYK1 514 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 NT5C1B-RDH14C9J2C7 533 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 FKTNO75072 461 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 ITIH2P19823 946 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 IFI35P80217 286 aaPredicted RBP14.73□□□□□ -0.05
ACTN1-205ENST00000538545 FOXR1Q6PIV2 292 aa14.73□□□□□ -0.05
ACTN1-205ENST00000538545 SIX6OS1Q8N1H7 587 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms