RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FTHL17Q9BXU8 183 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 MRPL4Q9BYD3 311 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 GTPBP4Q9BZE4 634 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 IFT122Q9HBG6 1241 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 POLD4Q9HCU8 107 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 TNFRSF12AQ9NP84 129 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 IL23AQ9NPF7 189 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 OLFML3Q9NRN5 406 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 PRMT7Q9NVM4 692 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CLDND1Q9NY35 253 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 TBC1D7Q9P0N9 293 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 KLHL14Q9P2G3 628 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 FBLN5Q9UBX5 448 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 PADI3Q9ULW8 664 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 EXOC7Q9UPT5 735 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 PIN4Q9Y237 131 aaKnown RBP4.69□□□□□ -1.66
SNHG1-208ENST00000538266 TRAF6Q9Y4K3 522 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 CNTNAP2Q9UHC6 1331 aa4.69□□□□□ -1.66
SNHG1-208ENST00000538266 SIP14410 1827 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 FRMD3A2A2Y4 597 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 N4BP3O15049 544 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 EIF3DO15371 548 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 NBNO60934 754 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 BAIAP3O94812 1187 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 KIF20AO95235 890 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 FGBP02675 491 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 CXCL10P02778 98 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 AMHP03971 560 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 PRKCBP05771 671 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 TPM3P06753 285 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 DBHP09172 617 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 GLI4P10075 376 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 IBSPP21815 317 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 FGFR4P22455 802 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 CASP1P29466 404 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 AXLP30530 894 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 MATR3P43243 847 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 LIG4P49917 911 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 RAB27AP51159 221 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 NCKAP1LP55160 1127 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 YBX1P67809 324 aaKnown RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 GABREP78334 506 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 MBTD1Q05BQ5 628 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 MGAT3Q09327 533 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 SQSTM1Q13501 440 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 STIM1Q13586 685 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 CBX2Q14781 532 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 FAM187BQ17R55 369 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ZNF568Q3ZCX4 644 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 PLEKHG4Q58EX7 1191 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ATF7IP2Q5U623 682 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 OTOP2Q7RTS6 562 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 FAM228AQ86W67 206 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ELOA2Q8IYF1 753 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 HACE1Q8IYU2 909 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 FBXO15Q8NCQ5 510 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 TMEM161BQ8NDZ6 487 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 DBF4BQ8NFT6 615 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 DNAJC19Q96DA6 116 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 CCDC51Q96ER9 411 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 GSDMAQ96QA5 445 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ACCSQ96QU6 501 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ADAM2Q99965 735 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ZFYVE21Q9BQ24 234 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 NTPCRQ9BSD7 190 aaKnown RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 TCHPQ9BT92 498 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 TRIM6Q9C030 488 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 CLSTN2Q9H4D0 955 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 AGO3Q9H9G7 860 aaKnown RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 RXFP1Q9HBX9 757 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ERVK-5Q9HDB9 667 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 CHST12Q9NRB3 414 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 C1orf112Q9NSG2 853 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 AGPAT5Q9NUQ2 364 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 SIRT5Q9NXA8 310 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ARHGAP28Q9P2N2 729 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ANKFY1Q9P2R3 1169 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 TBX20Q9UMR3 447 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ST3GAL5Q9UNP4 418 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 NOC2LQ9Y3T9 749 aaKnown RBP4.68□□□□□ -1.66
SNHG1-208ENST00000538266 PCDHA5Q9Y5H7 936 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 UBE4BO95155 1302 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 ADGRA3Q8IWK6 1321 aa4.68□□□□□ -1.66
SNHG1-208ENST00000538266 SCN5AQ14524 2016 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 MYOCOSA0A1B0GUC4 107 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ESYT3A0FGR9 886 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 H7BY64 318 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ACKR2O00590 384 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 AQP7O14520 342 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 PSMA7O14818 248 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 CLDN3O15551 220 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 B4GALT5O43286 388 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 TSPAN1O60635 241 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 RHOBTB3O94955 611 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 STAG3L1P0CL83 205 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 HARSP12081 509 aaKnown RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ATP2A2P16615 1042 aaKnown RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ARF4P18085 180 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 FPR2P25090 351 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 NMT1P30419 496 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms