RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TMEM119Q4V9L6 283 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ERMARDQ5T6L9 678 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 NUP93Q8N1F7 819 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 TC2NQ8N9U0 490 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 UROC1Q96N76 676 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ADGRE3Q9BY15 652 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ZDHHC6Q9H6R6 413 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ASAH2Q9NR71 780 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 IARS2Q9NSE4 1012 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 RBM12Q9NTZ6 932 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 MRPS23Q9Y3D9 190 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 COILP38432 576 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 CAMK2GQ13555 558 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 E2F5Q15329 346 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 KRT80Q6KB66 452 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 JAMLQ86YT9 394 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TAGAPQ8N103 731 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SLAIN1Q8ND83 568 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 GPR152Q8TDT2 470 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 COG1Q8WTW3 980 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SPIRE2Q8WWL2 714 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SGF29Q96ES7 293 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SF3B1O75533 1304 aaKnown RBP eCLIP5.54□□□□□ -1.526e-6■■■■■ 122.4
LRP6-203ENST00000538239 FRMPD4Q14CM0 1322 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TRDMT1O14717 391 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 RAD51CO43502 376 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 HAUS5O94927 633 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 JCHAINP01591 159 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 CYP3A4P08684 503 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 RRM1P23921 792 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 PTPN7P35236 360 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MAGEA4P43358 317 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SERPINB9P50453 376 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 PMS1P54277 932 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 POU4F1Q01851 419 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 DDX39BQ13838 428 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 PHKG1Q16816 387 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SDHAF4Q5VUM1 108 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 KIAA0895Q8NCT3 520 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SYN2Q92777 582 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 STAMBPL1Q96FJ0 436 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 AHCYL2Q96HN2 611 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 ERGIC2Q96RQ1 377 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 DNAJC7Q99615 494 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SHCBP1LQ9BZQ2 653 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 RUBCNLQ9H714 662 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 C6orf203Q9P0P8 240 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 PSMC3IPQ9P2W1 217 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 MARCOQ9UEW3 520 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 TRAF3IP3Q9Y228 551 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 F8VZ95 297 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 INHAP05111 366 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 NFICP08651 508 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 PCNAP12004 261 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 FAM110CQ1W6H9 321 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TTLL9Q3SXZ7 439 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TFDP3Q5H9I0 405 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 KIAA1324Q6UXG2 1013 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 ANKS1AQ92625 1134 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 IL17RAQ96F46 866 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 NR1H4Q96RI1 486 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 ASB7Q9H672 318 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SPASTQ9UBP0 616 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ANGPTL2Q9UKU9 493 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TDRKHQ9Y2W6 561 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 ANGPT2O15123 496 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ZBTB48P10074 688 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 GET4Q7L5D6 327 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 REM2Q8IYK8 340 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 KCNB2Q92953 911 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 OMDQ99983 421 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ZNF518BQ9C0D4 1074 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MIR1-1HGQ9H1L0 117 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 GTF3C4Q9UKN8 822 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 ZMYND8Q9ULU4 1186 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 SYNPO2Q9UMS6 1093 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MRC1P22897 1456 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MEIS2O14770 477 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 RAMP2O60895 175 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 MSH3P20585 1137 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TNFSF9P41273 254 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 CRYBB1P53674 252 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 OTUD4Q01804 1114 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 CREMQ03060 361 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 PRKCZQ05513 592 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 USP41Q3LFD5 358 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 C6orf10Q5SRN2 563 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 C1orf146Q5VVC0 180 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 BRSK2Q8IWQ3 736 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 TMA16Q96EY4 203 aaKnown RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 CNPY3Q9BT09 278 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 COPS7BQ9H9Q2 264 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 SLC28A3Q9HAS3 691 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 OLFML3Q9NRN5 406 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 PKD2L2Q9NZM6 624 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 SPATA31C2B4DYI2 1134 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 KPNA3O00505 521 aaPredicted RBP5.54□□□□□ -1.52
LRP6-203ENST00000538239 CRTAMO95727 393 aa5.54□□□□□ -1.52
LRP6-203ENST00000538239 CALCAP01258 141 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms