RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SLC44A3Q8N4M1 653 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 SMARCD2Q92925 531 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 CHFRQ96EP1 664 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 ZFYVE19Q96K21 471 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 SPAG5Q96R06 1193 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 SLITRK6Q9H5Y7 841 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 C11orf16Q9NQ32 467 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHFR-216ENST00000538235 TAS2R14Q9NYV8 317 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 HESX1Q9UBX0 185 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 HEPACAM2A8MVW5 462 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 CYP1A1P04798 512 aaPredicted RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 SKILP12757 684 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 STAT1P42224 750 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 PDE6CP51160 858 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 TPM4P67936 248 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 CDR2Q01850 454 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 TBX2Q13207 712 aaPredicted RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 STILQ15468 1287 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 OTUD1Q5VV17 481 aaPredicted RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 FAM183BPQ6ZVS7 135 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 ZNF571Q7Z3V5 609 aaPredicted RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 MRPS31Q92665 395 aaKnown RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 ACSF2Q96CM8 615 aaPredicted RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 MIS12Q9H081 205 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 CYLDQ9NQC7 956 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 TRPM5Q9NZQ8 1165 aa13.76□□□□□ -0.21
CHFR-216ENST00000538235 UXTQ9UBK9 157 aaPredicted RBP13.76□□□□□ -0.21
CHFR-216ENST00000538235 A0A1W2PQJ5 194 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 OTOL1A6NHN0 477 aaPredicted RBP13.75□□□□□ -0.21
CHFR-216ENST00000538235 TLR5O60602 858 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 ECI2O75521 394 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 GJB6O95452 261 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 ZBED1O96006 694 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 ABL1P00519 1130 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 UNGP13051 313 aaPredicted RBP13.75□□□□□ -0.21
CHFR-216ENST00000538235 WEE1P30291 646 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 CASP14P31944 242 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 ZNF75DP51815 510 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 NAA35Q5VZE5 725 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 WDR59Q6PJI9 974 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 OLFML1Q6UWY5 402 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 CACNA2D4Q7Z3S7 1137 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 TMEM110Q86TL2 294 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 SCUBE3Q8IX30 993 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 SLC30A5Q8TAD4 765 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 CPLX3Q8WVH0 158 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 OVCA2Q8WZ82 227 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 EDEM1Q92611 657 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 SLITRK1Q96PX8 696 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 GCNAQ96QF7 691 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 LHX5Q9H2C1 402 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 EPHX3Q9H6B9 360 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 GKN1Q9NS71 199 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 COMMD8Q9NX08 183 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 CALCOCO1Q9P1Z2 691 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 CPQQ9Y646 472 aa13.75□□□□□ -0.21
CHFR-216ENST00000538235 DDX3XO00571 662 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHFR-216ENST00000538235 MED7O43513 233 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 FGF19O95750 216 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 PDGFBP01127 241 aaPredicted RBP13.74□□□□□ -0.21
CHFR-216ENST00000538235 CKMP06732 381 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 RARGP13631 454 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 TFE3P19532 575 aaPredicted RBP13.74□□□□□ -0.21
CHFR-216ENST00000538235 PRKCIP41743 596 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 YWHAGP61981 247 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHFR-216ENST00000538235 GPC5P78333 572 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 SLC7A9P82251 487 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 FCHO2Q0JRZ9 810 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 ARHGAP15Q53QZ3 475 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 NAIF1Q69YI7 327 aaPredicted RBP13.74□□□□□ -0.21
CHFR-216ENST00000538235 TRIM68Q6AZZ1 485 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 SMYD5Q6GMV2 418 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 SCML4Q8N228 414 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 STK32AQ8WU08 396 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 CPA5Q8WXQ8 436 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 ELSPBP1Q96BH3 223 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 HSFY1Q96LI6 401 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 KLF16Q9BXK1 252 aaPredicted RBP13.74□□□□□ -0.21
CHFR-216ENST00000538235 FBXO44Q9H4M3 255 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 HPS4Q9NQG7 708 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 NAGPAQ9UK23 515 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 MYO6Q9UM54 1294 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 CAPN11Q9UMQ6 739 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 NENFQ9UMX5 172 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 ARHGAP26Q9UNA1 814 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
CHFR-216ENST00000538235 ZFP37Q9Y6Q3 630 aaPredicted RBP13.74□□□□□ -0.21
CHFR-216ENST00000538235 TRAV19A0A0A6YYK7 116 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 LEFTY2O00292 366 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 MSI1O43347 362 aaKnown RBP13.73□□□□□ -0.21
CHFR-216ENST00000538235 HDCP19113 662 aa13.73□□□□□ -0.21
CHFR-216ENST00000538235 DDX6P26196 483 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms