RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 NKIRAS1Q9NYS0 192 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 KLK14Q9P0G3 267 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 SENP1Q9P0U3 644 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 POC1B-GALNT4F8VUJ3 575 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 HCRTO43612 131 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 SNX3O60493 162 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 BANF1O75531 89 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 MYL3P08590 195 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 PDGFRBP09619 1106 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 LMO2P25791 158 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 PHBP35232 272 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 TAF6P49848 677 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 CCL14Q16627 93 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 CST9Q5W186 159 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ZC3H18Q86VM9 953 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ANKMY2Q8IV38 441 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 PDIK1LQ8N165 341 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 SGSM3Q96HU1 749 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ZNF670Q9BS34 389 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 KATNAL1Q9BW62 490 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 AP5M1Q9H0R1 490 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 KDM4CQ9H3R0 1056 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 GPATCH2LQ9NWQ4 482 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 XPO7Q9UIA9 1087 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 C17orf102A2RUQ5 167 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 CFAP69A5D8W1 941 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 FAM47DPA6NHR8 397 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 CCT8L1PA6NM43 557 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 TCP11X1B4DZS4 312 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 H7C0C1 242 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 APOL1O14791 398 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 PRPF4O43172 522 aaKnown RBP eCLIP11.9□□□□□ -0.53e-6■■■■□ 20.9
SLC28A1-204ENST00000538177 OAS1P00973 400 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 GHRP10912 638 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 CCDC130P13994 396 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 ACADSBP45954 432 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 ATP5OP48047 213 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 BCAR1P56945 870 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 PKN2Q16513 984 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 CA9Q16790 459 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 C1orf228Q6PIY5 440 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 SMG8Q8ND04 991 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 APPL2Q8NEU8 664 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 DENND1AQ8TEH3 1009 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 DHRS4Q9BTZ2 278 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 DNAI2Q9GZS0 605 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 SNX25Q9H3E2 840 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 ACSS3Q9H6R3 686 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 PSMC3IPQ9P2W1 217 aaPredicted RBP11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 IPPQ9Y573 584 aa11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 PDCD11Q14690 1871 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-204ENST00000538177 TRIP12Q14669 1992 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 BCLAF3A2AJT9 711 aaKnown RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 GNAT1P11488 350 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 WARSP23381 471 aaKnown RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 ADORA2BP29275 332 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 SSTR1P30872 391 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 STX2P32856 288 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 NRLP54845 237 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 GEMIN4P57678 1058 aaKnown RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 BASP1P80723 227 aaKnown RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 BEX3Q00994 111 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC20A2Q08357 652 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 KCNJ11Q14654 390 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 SV2CQ496J9 727 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 ZNF618Q5T7W0 954 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 CAPN12Q6ZSI9 719 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 C3orf62Q6ZUJ4 267 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 TAX1BP1Q86VP1 789 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 FBXO36Q8NEA4 188 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 MAGEB18Q96M61 343 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 TRABDQ9H4I3 376 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 MLXIPLQ9NP71 852 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 PAK5Q9P286 719 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 GTF2IRD1Q9UHL9 959 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 SMG5Q9UPR3 1016 aaKnown RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 CAPN7Q9Y6W3 813 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 DNM1LO00429 736 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 CHADO15335 359 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 HUS1O60921 280 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 TFE3P19532 575 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 LRPAP1P30533 357 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 L1CAMP32004 1257 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 RGS2P41220 211 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 WDR4P57081 412 aaKnown RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 LILRA4P59901 499 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 TAF1CQ15572 869 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 DPYSL2Q16555 572 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 SPRED3Q2MJR0 410 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 BBS9Q3SYG4 887 aa11.89□□□□□ -0.51
SLC28A1-204ENST00000538177 TTC31Q49AM3 519 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms