RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 DNAAF3Q8N9W5 541 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 SH3RF2Q8TEC5 729 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 PPP1R10Q96QC0 940 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 MKNK1Q9BUB5 465 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 DPH5Q9H2P9 285 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 CEP72Q9P209 647 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 MAD1L1Q9Y6D9 718 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 SLC16A3O15427 465 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 TBX4P57082 545 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 LONRF2Q1L5Z9 754 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 EFHC2Q5JST6 749 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 COLGALT2Q8IYK4 626 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 SORCS1Q8WY21 1168 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 RMDN1Q96DB5 314 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 MED15Q96RN5 788 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 FERMT1Q9BQL6 677 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 ABCG8Q9H221 673 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 LINC00597Q9H2U6 94 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 NSUN3Q9H649 340 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 ABHD10Q9NUJ1 306 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 DPP7Q9UHL4 492 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 AMFRQ9UKV5 643 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 COL6A6A6NMZ7 2263 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 SGK1O00141 431 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 KCNK1O00180 336 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 TRIM24O15164 1050 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 BUD23O43709 281 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 PCDH8O95206 1070 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 ASMTLO95671 621 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 C4BPAP04003 597 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 SERPING1P05155 500 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 CSH1P0DML2 217 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 CSH2P0DML3 217 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 COL6A1P12109 1028 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 YWHAZP63104 245 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 INTS6LQ5JSJ4 861 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 CMTM8Q8IZV2 173 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 MRPL43Q8N983 215 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 TKTL2Q9H0I9 626 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 SP110Q9HB58 689 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 RBM12Q9NTZ6 932 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.56□□□□□ -1.2
MSH6-209ENST00000538136 CGNQ9P2M7 1197 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 MYH7P12883 1935 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 TRAV19A0A0A6YYK7 116 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 A0A0U1RQJ8 604 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 TLDC2A0PJX2 215 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 MTMR11A4FU01 709 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 EPOPA6NHQ4 379 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 F8VZ95 297 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 SYNCRIPO60506 623 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 MFAP3LO75121 409 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 BAIAP3O94812 1187 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 NDUFA10O95299 355 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 LTFP02788 710 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 MNX1P50219 401 aaPredicted RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 RPS24P62847 133 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 BST2Q10589 180 aaKnown RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 NCAPHQ15003 741 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 NFIL3Q16649 462 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 AAK1Q2M2I8 961 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 SH3PXD2AQ5TCZ1 1133 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 RSPO2Q6UXX9 243 aaPredicted RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 ZNF571Q7Z3V5 609 aaPredicted RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 RPAINQ86UA6 219 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 CCDC89Q8N998 374 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 ATRIPQ8WXE1 791 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 RIPOR3Q96MK2 946 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 CPXM1Q96SM3 734 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
MSH6-209ENST00000538136 HPCAL4Q9UM19 191 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 INSL5Q9Y5Q6 135 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 WDR90Q96KV7 1748 aa7.56□□□□□ -1.2
MSH6-209ENST00000538136 ZNF263O14978 683 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 TRUB2O95900 331 aaKnown RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 IL1BP01584 269 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 RFC2P35250 354 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 RFC1P35251 1148 aaPredicted RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 SLC11A2P49281 568 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 BASP1P80723 227 aaKnown RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 KCNMA1Q12791 1236 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 PDXDC1Q6P996 788 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 DARS2Q6PI48 645 aaKnown RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 WDR59Q6PJI9 974 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 MFN1Q8IWA4 741 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 SLC39A11Q8N1S5 342 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 HMGB4Q8WW32 186 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 CRTAC1Q9NQ79 661 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 PCDHA13Q9Y5I0 950 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 GOLGA6L7A0A1B0GV03 622 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 SEC24AO95486 1093 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 PIRTP0C851 137 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 OR1E1P30953 314 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 USP46P62068 366 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 PITX1P78337 314 aaPredicted RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 SDE2Q6IQ49 451 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 SLC25A41Q8N5S1 370 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 C1orf54Q8WWF1 131 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms