RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PCDH19Q8TAB3 1148 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 MZB1Q8WU39 189 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 SOCS4Q8WXH5 440 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.86
UBE3B-207ENST00000537063 LPIN3Q9BQK8 851 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 TRIM6Q9C030 488 aaPredicted RBP9.71□□□□□ -0.86
UBE3B-207ENST00000537063 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 ACSS3Q9H6R3 686 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 GINS2Q9Y248 185 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 CCDC130P13994 396 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 RDXP35241 583 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 RGS2P41220 211 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 NKX3-2P78367 333 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 RNASELQ05823 741 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 ACTN3Q08043 901 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 PPP1R21Q6ZMI0 780 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 RGS9BPQ6ZS82 235 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 C7orf31Q8N865 590 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 SGSM3Q96HU1 749 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 CABS1Q96KC9 395 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 MAGEB18Q96M61 343 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 B3GNT5Q9BYG0 378 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 NSRP1Q9H0G5 558 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 ACTR5Q9H9F9 607 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 MTMR10Q9NXD2 777 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 PSMC3IPQ9P2W1 217 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 USP3Q9Y6I4 520 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 PTGESO14684 152 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 APOL1O14791 398 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 BANF1O75531 89 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 TOMM70O94826 608 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 LMO2P25791 158 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 L1CAMP32004 1257 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 GNL1P36915 607 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 TMED2Q15363 201 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 CDO1Q16878 200 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 ARHGEF18Q6ZSZ5 1173 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 FAM228AQ86W67 206 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 SRRM1Q8IYB3 904 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 HNRNPABQ99729 332 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 MAK16Q9BXY0 300 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 PATJQ8NI35 1801 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 RASA4BC9J798 803 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 GABRDO14764 452 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 XPO1O14980 1071 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 RASA4O43374 803 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 SNX3O60493 162 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 MYL3P08590 195 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 TFE3P19532 575 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 TKTP29401 623 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 GEMIN4P57678 1058 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 ATP11AP98196 1134 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 XRCC4Q13426 336 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 KRT81Q14533 505 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 FSCN1Q16658 493 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 ZNF618Q5T7W0 954 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 ADGRD1Q6QNK2 874 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 STRADAQ7RTN6 431 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 TAX1BP1Q86VP1 789 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 OSTM1Q86WC4 334 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 APPL2Q8NEU8 664 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 CLEC4CQ8WTT0 213 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 FRMD8Q9BZ67 464 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 AP5M1Q9H0R1 490 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 PAK5Q9P286 719 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 TBK1Q9UHD2 729 aa9.7□□□□□ -0.86
UBE3B-207ENST00000537063 XPO7Q9UIA9 1087 aaKnown RBP9.7□□□□□ -0.86
UBE3B-207ENST00000537063 FAM47DPA6NHR8 397 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 TYROBPO43914 113 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 ASMTLO95671 621 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 GNAT1P11488 350 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 PHBP35232 272 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 LIG3P49916 1009 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 LILRA4P59901 499 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 BEX3Q00994 111 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 SPRED3Q2MJR0 410 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 OTUD1Q5VV17 481 aaPredicted RBP9.69□□□□□ -0.86
UBE3B-207ENST00000537063 TAF2Q6P1X5 1199 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 DARS2Q6PI48 645 aaKnown RBP9.69□□□□□ -0.86
UBE3B-207ENST00000537063 ADGRF2Q8IZF7 708 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 CNPY4Q8N129 248 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 NT5C3BQ969T7 300 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 DNAI2Q9GZS0 605 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 NRDE2Q9H7Z3 1164 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 VPS37BQ9H9H4 285 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 PNPLA8Q9NP80 782 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 NGRNQ9NPE2 291 aaKnown RBP9.69□□□□□ -0.86
UBE3B-207ENST00000537063 GPATCH2LQ9NWQ4 482 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 SMG5Q9UPR3 1016 aaKnown RBP9.69□□□□□ -0.86
UBE3B-207ENST00000537063 TEX264Q9Y6I9 313 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 C1QAP02745 245 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 DESP17661 470 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 IFNAR2P48551 515 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 WDR4P57081 412 aaKnown RBP9.69□□□□□ -0.86
UBE3B-207ENST00000537063 LRRC14Q15048 493 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 TAF1CQ15572 869 aaPredicted RBP9.69□□□□□ -0.86
UBE3B-207ENST00000537063 PKN2Q16513 984 aaKnown RBP9.69□□□□□ -0.86
UBE3B-207ENST00000537063 KLHL38Q2WGJ6 581 aa9.69□□□□□ -0.86
UBE3B-207ENST00000537063 C4orf22Q6V702 233 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms