RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SCYL2Q6P3W7 929 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 SCUBE3Q8IX30 993 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 UHMK1Q8TAS1 419 aaKnown RBP14.15□□□□□ -0.14
SMG6-203ENST00000536871 KHSRPQ92945 711 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMG6-203ENST00000536871 SGSM3Q96HU1 749 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 C9orf72Q96LT7 481 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 FERMT1Q9BQL6 677 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 PCDH18Q9HCL0 1135 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 FAM105AQ9NUU6 356 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 STAP1Q9ULZ2 295 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 CDY2AQ9Y6F7 541 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 TLL2Q9Y6L7 1015 aa14.15□□□□□ -0.14
SMG6-203ENST00000536871 GABRDO14764 452 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 SEPT4O43236 478 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 THP07101 528 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 CD48P09326 243 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ZSCAN5DPP0CG00 497 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 RPL22P35268 128 aaKnown RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 SEC24CP53992 1094 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ZNF200P98182 395 aaPredicted RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 RNASELQ05823 741 aaKnown RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 PDIA2Q13087 525 aaKnown RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 CRHR2Q13324 411 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 CDO1Q16878 200 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ZC3H12AQ5D1E8 599 aaKnown RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 TRNP1Q6NT89 227 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 FOXR1Q6PIV2 292 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 SERINC5Q86VE9 423 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 CACNA2D3Q8IZS8 1091 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ANKS4BQ8N8V4 417 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 PYROXD1Q8WU10 500 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ATXN2LQ8WWM7 1075 aaKnown RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 CPT1BQ92523 772 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 LENG1Q96BZ8 264 aaPredicted RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 NKIRAS1Q9NYS0 192 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 KLK14Q9P0G3 267 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 FAM169AQ9Y6X4 670 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 H7C0C1 242 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 CYB561D2O14569 222 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 TRIM66O15016 1216 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 SPTLC1O15269 473 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 DAB1O75553 588 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 NPR3P17342 541 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ADORA2BP29275 332 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 MATKP42679 507 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ATP5OP48047 213 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ATP11AP98196 1134 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 KCTD19Q17RG1 926 aaPredicted RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 SLC25A52Q3SY17 297 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ZBED8Q8IZ13 594 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 TMEM130Q8N3G9 435 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 PLD5Q8N7P1 536 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 GLIS1Q8NBF1 620 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 SLC2A14Q8TDB8 520 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 DYDC1Q8WWB3 177 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 SNRNP25Q9BV90 132 aaKnown RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 SENP6Q9GZR1 1112 aaPredicted RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 DPEP3Q9H4B8 488 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 EURLQ9NYK6 297 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 RRN3Q9NYV6 651 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 SMG5Q9UPR3 1016 aaKnown RBP14.14□□□□□ -0.15
SMG6-203ENST00000536871 NAALADL1Q9UQQ1 740 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 NME7Q9Y5B8 376 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 SQORQ9Y6N5 450 aa14.14□□□□□ -0.15
SMG6-203ENST00000536871 HACD1B0YJ81 288 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 PTGESO14684 152 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 ZNF623O75123 536 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 ZBED1O96006 694 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 PDGFRBP09619 1106 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 FGFR1P11362 822 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 CCDC130P13994 396 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 PTPN1P18031 435 aaKnown RBP14.13□□□□□ -0.15
SMG6-203ENST00000536871 MAGEA6P43360 314 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 ZNF135P52742 658 aaPredicted RBP14.13□□□□□ -0.15
SMG6-203ENST00000536871 HDAC4P56524 1084 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 NBPF20Q3BBV1 942 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 CYP4F22Q6NT55 531 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 MRPL10Q7Z7H8 261 aaKnown RBP14.13□□□□□ -0.15
SMG6-203ENST00000536871 CCDC13Q8IYE1 715 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 LRRC39Q96DD0 335 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 SLC9A7Q96T83 725 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 PLCD4Q9BRC7 762 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 KLC2Q9H0B6 622 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 CXCL16Q9H2A7 254 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 VPS37BQ9H9H4 285 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 LRRC4Q9HBW1 653 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 LRRC4CQ9HCJ2 640 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 SSU72Q9NP77 194 aaKnown RBP14.13□□□□□ -0.15
SMG6-203ENST00000536871 NMRK2Q9NPI5 230 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 DNAJC17Q9NVM6 304 aaKnown RBP14.13□□□□□ -0.15
SMG6-203ENST00000536871 ZMYND8Q9ULU4 1186 aaPredicted RBP14.13□□□□□ -0.15
SMG6-203ENST00000536871 PTCH2Q9Y6C5 1203 aa14.13□□□□□ -0.15
SMG6-203ENST00000536871 GRAP2O75791 330 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 CABYRO75952 493 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 GSTA2P09210 222 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 FAM200BP0CF97 657 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 ETS1P14921 441 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms