RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 KMT2EQ8IZD2 1858 aa7.59□□□□□ -1.19
YBX3-206ENST00000536823 UBE4BO95155 1302 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 ZFHX2Q9C0A1 2572 aaPredicted RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 PIRO00625 290 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 PRRG1O14668 218 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 KIAA0391O15091 583 aaKnown RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 EXTL3O43909 919 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 SEC24AO95486 1093 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 TSPAN15O95858 294 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 LDHAP00338 332 aaKnown RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 CYP11A1P05108 521 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 SLFN14P0C7P3 912 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 LAMP2P13473 410 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 EDN3P14138 238 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 PLA2G5P39877 138 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 ARPP19P56211 112 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 KRT85P78386 507 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 HTR4Q13639 388 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 MYBPC2Q14324 1141 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 MLANAQ16655 118 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 PABPC1LQ4VXU2 614 aaKnown RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 OVOS1Q6IE37 1185 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 DSTYKQ6XUX3 929 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 TTLL10Q6ZVT0 673 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 EPM2AIP1Q7L775 607 aaPredicted RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 USP37Q86T82 979 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 SUGP1Q8IWZ8 645 aaKnown RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 ZSWIM2Q8NEG5 633 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 HPS3Q969F9 1004 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 ZNF560Q96MR9 790 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 SOX17Q9H6I2 414 aaPredicted RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 CYP4F11Q9HBI6 524 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 HCFC1R1Q9NWW0 138 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 DPP3Q9NY33 737 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 CDH7Q9ULB5 785 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 KCNH3Q9ULD8 1083 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 MAFFQ9ULX9 164 aa7.58□□□□□ -1.2
YBX3-206ENST00000536823 TIMM13Q9Y5L4 95 aaPredicted RBP7.58□□□□□ -1.2
YBX3-206ENST00000536823 GVINP1Q7Z2Y8 2422 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 PVALEFA0A1B0GWK0 134 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 GOLGA8IPA6NC78 632 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 GOLGA8JA6NMD2 632 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 ANHXE9PGG2 379 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 VNN2O95498 520 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 PDGFBP01127 241 aaPredicted RBP7.57□□□□□ -1.2
YBX3-206ENST00000536823 LRG1P02750 347 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 RHOP08100 348 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 PFKFB1P16118 471 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 CMA1P23946 247 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 CASP1P29466 404 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 HOXD13P35453 343 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 PNPLA4P41247 253 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 TAF6P49848 677 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 TFAMQ00059 246 aaKnown RBP7.57□□□□□ -1.2
YBX3-206ENST00000536823 ADCY1Q08828 1119 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 SLC5A9Q2M3M2 681 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 SV2CQ496J9 727 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.57□□□□□ -1.2
YBX3-206ENST00000536823 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
YBX3-206ENST00000536823 VN1R5Q7Z5H4 357 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 GRAMD1CQ8IYS0 662 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 CEP57L1Q8IYX8 460 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 GPD1LQ8N335 351 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 TMEM102Q8N9M5 508 aaPredicted RBP7.57□□□□□ -1.2
YBX3-206ENST00000536823 ITFG1Q8TB96 612 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 ZNF507Q8TCN5 953 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 EPS8L3Q8TE67 593 aaKnown RBP7.57□□□□□ -1.2
YBX3-206ENST00000536823 RSAD2Q8WXG1 361 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 FGF13Q92913 245 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 CHAMP1Q96JM3 812 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 SPATA32Q96LK8 384 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 PCIF1Q9H4Z3 704 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 PDE11AQ9HCR9 933 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 NPHS2Q9NP85 383 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 FAM53CQ9NYF3 392 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 HSPBP1Q9NZL4 362 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 DNMT3BQ9UBC3 853 aaKnown RBP7.57□□□□□ -1.2
YBX3-206ENST00000536823 USP25Q9UHP3 1055 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 DSEQ9UL01 958 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 YIPF1Q9Y548 306 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 ATP6V1DQ9Y5K8 247 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
YBX3-206ENST00000536823 EP300Q09472 2414 aaPredicted RBP7.56□□□□□ -1.2
YBX3-206ENST00000536823 FAM237AA0A1B0GTK4 181 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 MTMR11A4FU01 709 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 CYB561D2O14569 222 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 NARSO43776 548 aaKnown RBP7.56□□□□□ -1.2
YBX3-206ENST00000536823 KLRC4O43908 158 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 RECKO95980 971 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 OR4Q2P0C623 313 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 TMEM191BP0C7N4 346 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 SRFP11831 508 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 CEBPBP17676 345 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 POLR2BP30876 1174 aaKnown RBP7.56□□□□□ -1.2
YBX3-206ENST00000536823 AFMP43652 599 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 VCPP55072 806 aaKnown RBP7.56□□□□□ -1.2
YBX3-206ENST00000536823 PSMD2Q13200 908 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 GPR17Q13304 367 aa7.56□□□□□ -1.2
YBX3-206ENST00000536823 CUL4BQ13620 913 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms