RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TNFRSF10BO14763 440 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 CILPO75339 1184 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 APBB3O95704 486 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 OLFM2O95897 454 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 HDCP19113 662 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 PIK3CAP42336 1068 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 NDST1P52848 882 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 CACNA2D1P54289 1103 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 MARSP56192 900 aaKnown RBP13.19□□□□□ -0.3
PRKDC-207ENST00000536483 TCEAL6Q6IPX3 200 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 SPOPLQ6IQ16 392 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 WHAMMQ8TF30 809 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 SEMA4DQ92854 862 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 TCEAL3Q969E4 200 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 SLC35C1Q96A29 364 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 HNRNPABQ99729 332 aaKnown RBP13.19□□□□□ -0.3
PRKDC-207ENST00000536483 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
PRKDC-207ENST00000536483 ZNF518BQ9C0D4 1074 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 VPS45Q9NRW7 570 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 ANGPTL2Q9UKU9 493 aa13.19□□□□□ -0.3
PRKDC-207ENST00000536483 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 EML5Q05BV3 1969 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 PTPRDP23468 1912 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 ZNF840PA6NDX5 716 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 RHOBTB1O94844 696 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 RTN3O95197 1032 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-207ENST00000536483 ANXA13P27216 316 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 PMLP29590 882 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 MXI1P50539 228 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 PDE6CP51160 858 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 DGKEP52429 567 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 USP46P62068 366 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 ZXDBP98169 803 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 CREB5Q02930 508 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 NR1H3Q13133 447 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 ELF2Q15723 593 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 FAM35AQ86V20 835 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 NUP93Q8N1F7 819 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 ACDQ96AP0 544 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 EEF2KMTQ96G04 330 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
PRKDC-207ENST00000536483 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 KIAA1468Q9P260 1216 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-207ENST00000536483 EBF1Q9UH73 591 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 ARHGAP26Q9UNA1 814 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 INVSQ9Y283 1065 aa13.18□□□□□ -0.3
PRKDC-207ENST00000536483 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 ANTXRLA6NF34 631 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 CLDN5O00501 218 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 P4HA2O15460 535 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 CAVIN2O95810 425 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 ZDHHC11BP0C7U3 371 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 GBP1P32455 592 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 SEC13P55735 322 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 SLC7A9P82251 487 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 CBWD6Q4V339 395 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 CBWD3Q5JTY5 395 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 CBWD5Q5RIA9 395 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 SMYD5Q6GMV2 418 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 ACOT1Q86TX2 421 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 ZMIZ2Q8NF64 920 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 TSTD1Q8NFU3 115 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 SMOQ99835 787 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 NT5C1AQ9BXI3 368 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 DMAP1Q9NPF5 467 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-207ENST00000536483 TRPM5Q9NZQ8 1165 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 USP24Q9UPU5 2620 aa13.17□□□□□ -0.3
PRKDC-207ENST00000536483 ANAPC1Q9H1A4 1944 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 BCLAF3A2AJT9 711 aaKnown RBP13.16□□□□□ -0.3
PRKDC-207ENST00000536483 K7EQS6 105 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 LEFTY2O00292 366 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 KCNK5O95279 499 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 NFATC1O95644 943 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 GNA14O95837 355 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
PRKDC-207ENST00000536483 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
PRKDC-207ENST00000536483 OPRD1P41143 372 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 TUBP50607 506 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 C2orf27AQ580R0 203 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 USP33Q8TEY7 942 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 ELMO3Q96BJ8 720 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 KCNK16Q96T55 309 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 EDEM2Q9BV94 578 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 TPSD1Q9BZJ3 242 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 UBXN6Q9BZV1 441 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 HMGXB4Q9UGU5 601 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
PRKDC-207ENST00000536483 C4orf47A7E2U8 309 aa13.15□□□□□ -0.3
PRKDC-207ENST00000536483 HHLA1C9JL84 531 aa13.15□□□□□ -0.3
PRKDC-207ENST00000536483 YWHAQP27348 245 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms