RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ACP6Q9NPH0 428 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 TLR8Q9NR97 1041 aaKnown RBP13.87□□□□□ -0.19
PRKDC-206ENST00000536429 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 MRPS17Q9Y2R5 130 aaKnown RBP13.87□□□□□ -0.19
PRKDC-206ENST00000536429 NFE2L3Q9Y4A8 694 aa13.87□□□□□ -0.19
PRKDC-206ENST00000536429 ZNF638Q14966 1978 aaKnown RBP13.87□□□□□ -0.19
PRKDC-206ENST00000536429 KIF26AQ9ULI4 1882 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-206ENST00000536429 KCNJ18B7U540 433 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 XPO1O14980 1071 aaKnown RBP13.86□□□□□ -0.19
PRKDC-206ENST00000536429 MBD3O95983 291 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 IRF1P10914 325 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 RARGP13631 454 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 KRT5P13647 590 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 PON1P27169 355 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 GJA4P35212 333 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 BCAT1P54687 386 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 BST2Q10589 180 aaKnown RBP13.86□□□□□ -0.19
PRKDC-206ENST00000536429 MTAPQ13126 283 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 KCNJ12Q14500 433 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 EXOC3L4Q17RC7 722 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 GAB4Q2WGN9 574 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 VWA3BQ502W6 1294 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 CCDC183Q5T5S1 534 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 DPY19L2P1Q6NXN4 242 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 LCLAT1Q6UWP7 414 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 GBP6Q6ZN66 633 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 Q6ZS52 159 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 BHLHA9Q7RTU4 235 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 CCDC186Q7Z3E2 898 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 MSANTD3Q96H12 275 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 TUBGCP2Q9BSJ2 902 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 ULBP1Q9BZM6 244 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 UBXN6Q9BZV1 441 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 CYLDQ9NQC7 956 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRKDC-206ENST00000536429 SPATA6Q9NWH7 488 aaPredicted RBP13.86□□□□□ -0.19
PRKDC-206ENST00000536429 NAGPAQ9UK23 515 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRKDC-206ENST00000536429 CNTN6Q9UQ52 1028 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 CACNA1IQ9P0X4 2223 aa13.86□□□□□ -0.19
PRKDC-206ENST00000536429 BECN2A8MW95 431 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 PIK3R2O00459 728 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 GREM1O60565 184 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-206ENST00000536429 HOXC13P31276 330 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 RPS9P46781 194 aaKnown RBP13.85□□□□□ -0.19
PRKDC-206ENST00000536429 RGS7P49802 495 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 TKTL1P51854 596 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 ARHGAP44Q17R89 818 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 CT47A1Q5JQC4 288 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-206ENST00000536429 FSTL4Q6MZW2 842 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 PMF1Q6P1K2 205 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 FAM114A1Q8IWE2 563 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 CPA6Q8N4T0 437 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 ENOX1Q8TC92 643 aaKnown RBP13.85□□□□□ -0.19
PRKDC-206ENST00000536429 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
PRKDC-206ENST00000536429 ATP2A3Q93084 1043 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 KLF16Q9BXK1 252 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-206ENST00000536429 NACA2Q9H009 215 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 CHRDQ9H2X0 955 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 C2orf42Q9NWW7 574 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 TAB2Q9NYJ8 693 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 HESX1Q9UBX0 185 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 APEX2Q9UBZ4 518 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 KIAA1257Q9ULG3 409 aa13.85□□□□□ -0.19
PRKDC-206ENST00000536429 GTPBP10A4D1E9 387 aaKnown RBP13.84□□□□□ -0.19
PRKDC-206ENST00000536429 ANTXRLA6NF34 631 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 M0QYV0 167 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 NCAM2O15394 837 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 EGFP01133 1207 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 CYP17A1P05093 508 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 SP9P0CG40 484 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 PNMA6AP0CW24 399 aaPredicted RBP13.84□□□□□ -0.19
PRKDC-206ENST00000536429 PLA2G4AP47712 749 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 GALK1P51570 392 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 ADIGQ0VDE8 80 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 KCNMA1Q12791 1236 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 CCINQ13939 588 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 CNGA2Q16280 664 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 TCP11X2Q5H9J9 407 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 TMEM196Q5HYL7 178 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 C10orf120Q5SQS8 335 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 CDKAL1Q5VV42 579 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 PM20D1Q6GTS8 502 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 DENND1BQ6P3S1 775 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 PKN3Q6P5Z2 889 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 TSSK4Q6SA08 328 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 SASS6Q6UVJ0 657 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 BBS7Q8IWZ6 715 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 ADGRG2Q8IZP9 1017 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 SLC35F5Q8WV83 523 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 EZH1Q92800 747 aaPredicted RBP13.84□□□□□ -0.19
PRKDC-206ENST00000536429 ANO10Q9NW15 660 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 FANCLQ9NW38 375 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 PATJQ8NI35 1801 aa13.84□□□□□ -0.19
PRKDC-206ENST00000536429 ZFHX2Q9C0A1 2572 aaPredicted RBP13.84□□□□□ -0.19
PRKDC-206ENST00000536429 TRDMT1O14717 391 aaKnown RBP13.83□□□□□ -0.2
PRKDC-206ENST00000536429 LAMTOR5O43504 91 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 NFATC1O95644 943 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms