RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 EXOC1LA0A1B0GW35 172 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 HTR3EA5X5Y0 456 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 A8MXQ7 604 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 PMM2O15305 246 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 SLC25A27O95847 323 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 C4BPAP04003 597 aaKnown RBP14.55□□□□□ -0.08
LIG1-203ENST00000536218 TGFB3P10600 412 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 GJA5P36382 358 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 ADCY8P40145 1251 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 PPIDQ08752 370 aaKnown RBP14.55□□□□□ -0.08
LIG1-203ENST00000536218 ASPHQ12797 758 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 PDK3Q15120 406 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 TARBP2Q15633 366 aaKnown RBP14.55□□□□□ -0.08
LIG1-203ENST00000536218 ZACNQ401N2 412 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 SFT2D3Q587I9 215 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 LVRNQ6Q4G3 990 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 THNSL1Q8IYQ7 743 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 KIAA1586Q9HCI6 787 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 NDUFA13Q9P0J0 144 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 TBC1D30Q9Y2I9 924 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 INO80B-WBP1J3KQ70 363 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 MAGEB2O15479 319 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 VNN1O95497 513 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 CLPTM1O96005 669 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 CFHP08603 1231 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 FGFR1P11362 822 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 GTF2H1P32780 548 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 CLCN3P51790 818 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 EMP3P54852 163 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 LAMTOR4Q0VGL1 99 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 ZNF394Q53GI3 561 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 SLFN12LQ6IEE8 588 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 HIPK4Q8NE63 616 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 PYDC1Q8WXC3 89 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 INO80BQ9C086 356 aaPredicted RBP14.54□□□□□ -0.08
LIG1-203ENST00000536218 APOBEC3GQ9HC16 384 aaKnown RBP14.54□□□□□ -0.08
LIG1-203ENST00000536218 ANAPC5Q9UJX4 755 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 A0A0B4J269 797 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 MAFO75444 373 aaPredicted RBP14.54□□□□□ -0.08
LIG1-203ENST00000536218 ENO1P06733 434 aaKnown RBP14.54□□□□□ -0.08
LIG1-203ENST00000536218 HSPA6P17066 643 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 VCLP18206 1134 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 NFKBIAP25963 317 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 PCSK6P29122 969 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 AQP4P55087 323 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 NAA20P61599 178 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 PPIL2Q13356 520 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 ITGA9Q13797 1035 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 PKN2Q16513 984 aaKnown RBP14.54□□□□□ -0.08
LIG1-203ENST00000536218 CELF3Q5SZQ8 465 aaKnown RBP14.54□□□□□ -0.08
LIG1-203ENST00000536218 RGS9BPQ6ZS82 235 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 FBXO27Q8NI29 283 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 CCDC110Q8TBZ0 833 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 KLHL4Q9C0H6 718 aa14.54□□□□□ -0.08
LIG1-203ENST00000536218 NDUFB5O43674 189 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 GZMAP12544 262 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 CTNNA2P26232 953 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 KDSRQ06136 332 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 NADK2Q4G0N4 442 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 DDX1Q92499 740 aaKnown RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 MPHOSPH6Q99547 160 aaKnown RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 C12orf65Q9H3J6 166 aaKnown RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 HEMK1Q9Y5R4 338 aaPredicted RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 LCTP09848 1927 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 CST3P01034 146 aaPredicted RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 CD58P19256 250 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 YY1P25490 414 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 HALP42357 657 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 PSMD7P51665 324 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 CHN2P52757 468 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 NCOA4Q13772 614 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 MAPK6Q16659 721 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 FASTKD5Q7L8L6 764 aaKnown RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 DIS3LQ8TF46 1054 aaKnown RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 ATG4AQ8WYN0 398 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 PANX3Q96QZ0 392 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 SRPK1Q96SB4 655 aaKnown RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 TUBB6Q9BUF5 446 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 NACA2Q9H009 215 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 TSC22D4Q9Y3Q8 395 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 PORP16435 677 aaPredicted RBP14.53□□□□□ -0.08
LIG1-203ENST00000536218 CLUL1Q15846 466 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 ACAD10Q6JQN1 1059 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 GPAT2Q6NUI2 795 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 TMEM130Q8N3G9 435 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 FNDC8Q8TC99 324 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 MTBPQ96DY7 904 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 TRIM55Q9BYV6 548 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 KANSL3Q9P2N6 904 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 KCNH4Q9UQ05 1017 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 NUB1Q9Y5A7 615 aa14.53□□□□□ -0.08
LIG1-203ENST00000536218 B4GALT5O43286 388 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 GRIN3BO60391 1043 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 PRKCBP05771 671 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 UQCRBP14927 111 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 TFAMQ00059 246 aaKnown RBP14.52□□□□□ -0.08
LIG1-203ENST00000536218 GCNT1Q02742 428 aa14.52□□□□□ -0.08
LIG1-203ENST00000536218 C15orf39Q6ZRI6 1047 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms