RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PSMC1P62191 440 aaKnown RBP18.69■□□□□ 0.58
RAB40C-203ENST00000535977 SLC25A11Q02978 314 aaKnown RBP18.69■□□□□ 0.58
RAB40C-203ENST00000535977 PTPN20Q4JDL3 420 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 ZNF484Q5JVG2 852 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 SCARA5Q6ZMJ2 495 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 NLRP4Q96MN2 994 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 CENPKQ9BS16 269 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 CDT1Q9H211 546 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 ASB7Q9H672 318 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 SLCO1B3Q9NPD5 702 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 HSFX1Q9UBD0 423 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 TBK1Q9UHD2 729 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 PRPF4O43172 522 aaKnown RBP eCLIP18.68■□□□□ 0.582e-7■■■■■ 34.8
RAB40C-203ENST00000535977 MBTD1Q05BQ5 628 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 CYP4A22Q5TCH4 519 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 SULF1Q8IWU6 871 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 STKLD1Q8NE28 680 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 MMP19Q99542 508 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 TMCC1O94876 653 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 PHBP35232 272 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 GABRB2P47870 512 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 WDR4P57081 412 aaKnown RBP18.68■□□□□ 0.58
RAB40C-203ENST00000535977 TRABD2AQ86V40 505 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 PPIL6Q8IXY8 311 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 MROH8Q9H579 483 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 SYNCQ9H7C4 482 aa18.68■□□□□ 0.58
RAB40C-203ENST00000535977 PEX10O60683 326 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 ASLP04424 464 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 KRT19P08727 400 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 CETPP11597 493 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 TSHRP16473 764 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 KDELR1P24390 212 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 CDK7P50613 346 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 TTLL4Q14679 1199 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 TXNRD3NBQ6F5E7 133 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 TRIM50Q86XT4 487 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 IFNLR1Q8IU57 520 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-203ENST00000535977 SLX1AQ9BQ83 275 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 DDX43Q9NXZ2 648 aaKnown RBP18.67■□□□□ 0.58
RAB40C-203ENST00000535977 ERAP1Q9NZ08 941 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 CHMP2BQ9UQN3 213 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 MAGEB2O15479 319 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 LRCH4O75427 683 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 HMGCRP04035 888 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 ZSCAN5DPP0CG00 497 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 OSBPP22059 807 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 TMED2Q15363 201 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 GLIS1Q8NBF1 620 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 TMEM121Q9BTD3 319 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 ADARB2Q9NS39 739 aaKnown RBP18.67■□□□□ 0.58
RAB40C-203ENST00000535977 KIAA1257Q9ULG3 409 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 POLIQ9UNA4 740 aa18.67■□□□□ 0.58
RAB40C-203ENST00000535977 POLR2AP24928 1970 aaKnown RBP18.67■□□□□ 0.58
RAB40C-203ENST00000535977 A6NJR5 290 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 ASB14A6NK59 587 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 GOLGA8SH3BPF8 625 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 CCDC166P0CW27 439 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 VDRP11473 427 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 ARL4CP56559 192 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 PTPN11Q06124 597 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-203ENST00000535977 WDR78Q5VTH9 848 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 EEF1DP3Q658K8 133 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 PRUNE1Q86TP1 453 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 XYLT1Q86Y38 959 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 TMEM176AQ96HP8 235 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 ASNSD1Q9NWL6 643 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 STX18Q9P2W9 335 aaKnown RBP18.66■□□□□ 0.58
RAB40C-203ENST00000535977 SIX4Q9UIU6 781 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 FARP1Q9Y4F1 1045 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-203ENST00000535977 WASF2Q9Y6W5 498 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 ITGA2BP08514 1039 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
RAB40C-203ENST00000535977 HIF1AQ16665 826 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 ANKRD13AQ8IZ07 590 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 C1orf127Q8N9H9 656 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 CMASQ8NFW8 434 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-203ENST00000535977 C10orf82Q8WW14 230 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 RSAD2Q8WXG1 361 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 LENG1Q96BZ8 264 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-203ENST00000535977 MCRS1Q96EZ8 462 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 VPS37BQ9H9H4 285 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 SSU72Q9NP77 194 aaKnown RBP18.66■□□□□ 0.58
RAB40C-203ENST00000535977 ZFP69BQ9UJL9 534 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 KCNH4Q9UQ05 1017 aa18.66■□□□□ 0.58
RAB40C-203ENST00000535977 CST8O60676 142 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 IFNB1P01574 187 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 CXCL8P10145 99 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 OSTNP61366 133 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 OTUD4Q01804 1114 aaKnown RBP18.65■□□□□ 0.58
RAB40C-203ENST00000535977 RGS9BPQ6ZS82 235 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 SLC4A11Q8NBS3 891 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 SMC1BQ8NDV3 1235 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 ACTL9Q8TC94 416 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 NAT14Q8WUY8 206 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 SMC6Q96SB8 1091 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 CILPO75339 1184 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 PGK2P07205 417 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 STAG3L1P0CL83 205 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 ETS1P14921 441 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 PDIA2Q13087 525 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms