RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 PDGFRLQ15198 375 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 PKDCCQ504Y2 493 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 TRIM68Q6AZZ1 485 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 ARHGAP18Q8N392 663 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 ULBP1Q9BZM6 244 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 EBF3Q9H4W6 596 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 C8orf33Q9H7E9 229 aaPredicted RBP23.37■■□□□ 1.33
VPS37C-202ENST00000535818 NMUR1Q9HB89 426 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 DUS2Q9NX74 493 aaKnown RBP23.37■■□□□ 1.33
VPS37C-202ENST00000535818 AJAP1Q9UKB5 411 aaPredicted RBP23.37■■□□□ 1.33
VPS37C-202ENST00000535818 MRPS17Q9Y2R5 130 aaKnown RBP23.37■■□□□ 1.33
VPS37C-202ENST00000535818 SIT1Q9Y3P8 196 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 WNT6Q9Y6F9 365 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 CAVIN2O95810 425 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 RALAP11233 206 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 RARGP13631 454 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 GLULP15104 373 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 ZNF18P17022 549 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 RGS7P49802 495 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 ADIGQ0VDE8 80 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 ITPRIPL2Q3MIP1 535 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 KLHDC7AQ5VTJ3 777 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 TADA2BQ86TJ2 420 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 PJA1Q8NG27 643 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 OSCP1Q8WVF1 389 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 MSANTD3Q96H12 275 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 PCMTD1Q96MG8 357 aaPredicted RBP23.36■■□□□ 1.33
VPS37C-202ENST00000535818 FAM83CQ9BQN1 747 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 FUCA2Q9BTY2 467 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 DDX23Q9BUQ8 820 aaKnown RBP23.36■■□□□ 1.33
VPS37C-202ENST00000535818 LTB4R2Q9NPC1 389 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 CFAP97Q9P2B7 532 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 FHOD1Q9Y613 1164 aa23.36■■□□□ 1.33
VPS37C-202ENST00000535818 PI15O43692 258 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 ZBED1O96006 694 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 LCP1P13796 627 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 ATP5C1P36542 298 aaKnown RBP23.35■■□□□ 1.33
VPS37C-202ENST00000535818 SOX9P48436 509 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 ZXDBP98169 803 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 PTK2Q05397 1052 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 RUNX3Q13761 415 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 DHX40Q8IX18 779 aaKnown RBP23.35■■□□□ 1.33
VPS37C-202ENST00000535818 ZNF606Q8WXB4 792 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 KCTD13Q8WZ19 329 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 FAM3CQ92520 227 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 ACP6Q9NPH0 428 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 CYLDQ9NQC7 956 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 OSER1Q9NX31 292 aa23.35■■□□□ 1.33
VPS37C-202ENST00000535818 NDRG2Q9UN36 371 aaKnown RBP23.35■■□□□ 1.33
VPS37C-202ENST00000535818 LGALS16A8MUM7 142 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 IRF1P10914 325 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 ARSAP15289 507 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 UCHL3P15374 230 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 YWHAGP61981 247 aaKnown RBP eCLIP23.34■■□□□ 1.33
VPS37C-202ENST00000535818 DRAP1Q14919 205 aaPredicted RBP23.34■■□□□ 1.33
VPS37C-202ENST00000535818 C10orf120Q5SQS8 335 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 SMYD5Q6GMV2 418 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 C1orf228Q6PIY5 440 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 SCD5Q86SK9 330 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 CPA6Q8N4T0 437 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 SLC35F5Q8WV83 523 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 ATP2A3Q93084 1043 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 CDK5RAP1Q96SZ6 601 aaKnown RBP23.34■■□□□ 1.33
VPS37C-202ENST00000535818 NELL2Q99435 816 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 HSD3B7Q9H2F3 369 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 HPS4Q9NQG7 708 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.34■■□□□ 1.33
VPS37C-202ENST00000535818 CLIC5Q9NZA1 410 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 RAPGEFL1Q9UHV5 662 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 NUDT5Q9UKK9 219 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 SH3BP1Q9Y3L3 701 aa23.34■■□□□ 1.33
VPS37C-202ENST00000535818 FAM170BA6NMN3 283 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 SPECC1L-ADORA2AF8WAN1 911 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 FOXN3O00409 490 aaPredicted RBP23.33■■□□□ 1.33
VPS37C-202ENST00000535818 TBX18O95935 607 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 DCNP07585 359 aaKnown RBP23.33■■□□□ 1.33
VPS37C-202ENST00000535818 PNMA6AP0CW24 399 aaPredicted RBP23.33■■□□□ 1.33
VPS37C-202ENST00000535818 ATP1A3P13637 1013 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 TARSP26639 723 aaKnown RBP23.33■■□□□ 1.33
VPS37C-202ENST00000535818 MLLT6P55198 1093 aaPredicted RBP23.33■■□□□ 1.33
VPS37C-202ENST00000535818 UBXN1Q04323 297 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 GOLGA8FQ08AF8 430 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 GOLGA8DPQ0D2H9 430 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 MEA1Q16626 185 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 DPY19L2P1Q6NXN4 242 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 PMF1Q6P1K2 205 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 RALGPS2Q86X27 583 aaPredicted RBP23.33■■□□□ 1.33
VPS37C-202ENST00000535818 HSFY1Q96LI6 401 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 PLCB1Q9NQ66 1216 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 ST7Q9NRC1 585 aa23.33■■□□□ 1.33
VPS37C-202ENST00000535818 FAM207AQ9NSI2 230 aaPredicted RBP23.33■■□□□ 1.33
VPS37C-202ENST00000535818 PIK3R2O00459 728 aa23.32■■□□□ 1.32
VPS37C-202ENST00000535818 SLC9A3R1O14745 358 aaPredicted RBP23.32■■□□□ 1.32
VPS37C-202ENST00000535818 SCAMP3O14828 347 aaKnown RBP23.32■■□□□ 1.32
VPS37C-202ENST00000535818 NCAM2O15394 837 aa23.32■■□□□ 1.32
VPS37C-202ENST00000535818 CTHP32929 405 aa23.32■■□□□ 1.32
VPS37C-202ENST00000535818 KLK7P49862 253 aa23.32■■□□□ 1.32
VPS37C-202ENST00000535818 TPM4P67936 248 aa23.32■■□□□ 1.32
VPS37C-202ENST00000535818 SYCP1Q15431 976 aa23.32■■□□□ 1.32
VPS37C-202ENST00000535818 EML3Q32P44 896 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms