RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PBXIP1Q96AQ6 731 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 ZFYVE19Q96K21 471 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 HSFY1Q96LI6 401 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 CPQQ9Y646 472 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 NUP210Q8TEM1 1887 aaPredicted RBP23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 F8VZ95 297 aa23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 LEFTY2O00292 366 aa23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 ZBED1O96006 694 aa23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 ADIGQ0VDE8 80 aa23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 MTF1Q14872 753 aa23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 NDRG1Q92597 394 aaKnown RBP23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 ZFRQ96KR1 1074 aaKnown RBP23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 THG1LQ9NWX6 298 aaKnown RBP23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 SMPD4Q9NXE4 827 aa23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 DAAM1Q9Y4D1 1078 aa23.9■■□□□ 1.42
SFSWAP-204ENST00000535399 MYH10P35580 1976 aa23.89■■□□□ 1.42
SFSWAP-204ENST00000535399 TBX18O95935 607 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 MBL2P11226 248 aaPredicted RBP23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 RARGP13631 454 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 RPL34P49207 117 aaKnown RBP23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 PLCB2Q00722 1185 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 MLF2Q15773 248 aaPredicted RBP23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 SCML4Q8N228 414 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 PCMTD1Q96MG8 357 aaPredicted RBP23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 NAP1L5Q96NT1 182 aaPredicted RBP23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 FAM83CQ9BQN1 747 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 GKN1Q9NS71 199 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 CLIC5Q9NZA1 410 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 NAGPAQ9UK23 515 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 PCDHGC3Q9UN70 934 aa23.89■■□□□ 1.41
SFSWAP-204ENST00000535399 A0A1B0GTH6 734 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 LCP1P13796 627 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 PSEN1P49768 467 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 JAM2P57087 298 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 BPIFB4P59827 614 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 FILIP1LQ4L180 1135 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 SIX6OS1Q8N1H7 587 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 ARHGAP18Q8N392 663 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 FBXL6Q8N531 539 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 ZNF276Q8N554 614 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 NEK11Q8NG66 645 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 STK32AQ8WU08 396 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 NLRC4Q9NPP4 1024 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 CNGB3Q9NQW8 809 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 HEBP1Q9NRV9 189 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 CYTH4Q9UIA0 394 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 ZDBF2Q9HCK1 2354 aa23.88■■□□□ 1.41
SFSWAP-204ENST00000535399 SHISA7A6NL88 538 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 PIK3R2O00459 728 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 STARD6P59095 220 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 YWHAGP61981 247 aaKnown RBP eCLIP23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 TPM4P67936 248 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 PRKCQQ04759 706 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 TNK2Q07912 1038 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 CWF19L1Q69YN2 538 aaKnown RBP23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 KLHDC10Q6PID8 442 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 LRSAM1Q6UWE0 723 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 WDTC1Q8N5D0 677 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 TTC16Q8NEE8 873 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 SLC4A5Q9BY07 1137 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 TSPY26PQ9H489 355 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 TBC1D17Q9HA65 648 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 HPS4Q9NQG7 708 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 NUDT5Q9UKK9 219 aa23.87■■□□□ 1.41
SFSWAP-204ENST00000535399 GOLGA6L19H0YKK7 550 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 SERPINC1P01008 464 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 RALAP11233 206 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 CYP11B1P15538 503 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 DAOAP59103 153 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 FANCCQ00597 558 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 TRIM68Q6AZZ1 485 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 CC2D1AQ6P1N0 951 aaPredicted RBP23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 DDX42Q86XP3 938 aaKnown RBP eCLIP23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 PASD1Q8IV76 773 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 KIAA1958Q8N8K9 716 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 OSCP1Q8WVF1 389 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 SHDQ96IW2 340 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 DDX23Q9BUQ8 820 aaKnown RBP23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 KLF16Q9BXK1 252 aaPredicted RBP23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 NACA2Q9H009 215 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 LHX5Q9H2C1 402 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 MFSD1Q9H3U5 465 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 CFAP97Q9P2B7 532 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 WNT6Q9Y6F9 365 aa23.86■■□□□ 1.41
SFSWAP-204ENST00000535399 YJEFN3A6XGL0 299 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 E7ENQ6 273 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 MDM4O15151 490 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 ARSAP15289 507 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 KRT9P35527 623 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 SOX5P35711 763 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 ATP5C1P36542 298 aaKnown RBP23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 NR1I3Q14994 352 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 PDGFRLQ15198 375 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 C10orf120Q5SQS8 335 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 TPRG1Q6ZUI0 275 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 FLCNQ8NFG4 579 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 CSGALNACT1Q8TDX6 532 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 IRGQQ8WZA9 623 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 DDX1Q92499 740 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms