RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 TWNKQ96RR1 684 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 PNKPQ96T60 521 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 RTKNQ9BST9 563 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 EBF1Q9UH73 591 aa17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.11■□□□□ 0.33
CLSTN3-204ENST00000535313 MYH10P35580 1976 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 TLR5O60602 858 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 CILPO75339 1184 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 APODP05090 189 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 SLC6A11P48066 632 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 NUCB2P80303 420 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 MRPS21P82921 87 aaKnown RBP17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 GAD2Q05329 585 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 PNOCQ13519 176 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 LY6G5CQ5SRR4 150 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 BTBD8Q5XKL5 378 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 CLEC20AQ6ZU45 233 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 KBTBD6Q86V97 674 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 FMR1NBQ8N0W7 255 aaPredicted RBP17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 NETO1Q8TDF5 533 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 JAKMIP2Q96AA8 810 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 NCOR2Q9Y618 2525 aa17.1■□□□□ 0.33
CLSTN3-204ENST00000535313 SPAG17Q6Q759 2223 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 MED19A0JLT2 244 aaPredicted RBP17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 KAT7O95251 611 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 SMC2O95347 1197 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 IRF1P10914 325 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 ACO1P21399 889 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 MXI1P50539 228 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 DGKEP52429 567 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 PREPLQ4J6C6 727 aaPredicted RBP17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 FBXL13Q8NEE6 735 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 FAXDC2Q96IV6 333 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 ZC3H10Q96K80 434 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 TSG101Q99816 390 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 DUSP9Q99956 384 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 ARRDC1-AS1Q9H2J1 176 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 PNPLA8Q9NP80 782 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 ARHGEF4Q9NR80 690 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 RALGAPA1Q6GYQ0 2036 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 SPTBN2O15020 2390 aa17.09■□□□□ 0.33
CLSTN3-204ENST00000535313 CYP26A1O43174 497 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 EPN2O95208 641 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 ATP5C1P36542 298 aaKnown RBP17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 GRIA2P42262 883 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 PRCPP42785 496 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 MCCD1P59942 119 aaPredicted RBP17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 ELF2Q15723 593 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 GPRIN1Q7Z2K8 1008 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 C12orf40Q86WS4 652 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 BBS7Q8IWZ6 715 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 CCDC33Q8N5R6 958 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 WHAMMQ8TF30 809 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 HEXIM2Q96MH2 286 aaKnown RBP17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 CYLDQ9NQC7 956 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 RAB20Q9NX57 234 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 MMP17Q9ULZ9 603 aa17.08■□□□□ 0.32
CLSTN3-204ENST00000535313 HHLA1C9JL84 531 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 ALDH1A2O94788 518 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 RHOBTB1O94844 696 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 TBX18O95935 607 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 TNFRSF4P43489 277 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 PGFP49763 221 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 KDSRQ06136 332 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 CRY1Q16526 586 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 ANO4Q32M45 955 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 PLK5Q496M5 336 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 HSF5Q4G112 596 aaPredicted RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 AASDHQ4L235 1098 aaPredicted RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 ZNF394Q53GI3 561 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 USP39Q53GS9 565 aaKnown RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 DCAF17Q5H9S7 520 aaPredicted RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 TCERG1LQ5VWI1 586 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 ANO7Q6IWH7 933 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 NUDT18Q6ZVK8 323 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 TADA2BQ86TJ2 420 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 C12orf50Q8NA57 414 aaPredicted RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 SEMA4DQ92854 862 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 SMARCE1Q969G3 411 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 KLF16Q9BXK1 252 aaPredicted RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 DUSP16Q9BY84 665 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 SPHK2Q9NRA0 654 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 LSM7Q9UK45 103 aaKnown RBP17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 PCDHGA5Q9Y5G8 931 aa17.07■□□□□ 0.32
CLSTN3-204ENST00000535313 MYO16Q9Y6X6 1858 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms