RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 E2F7Q96AV8 911 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 GPRASP2Q96D09 838 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 KLHL1Q9NR64 748 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 ACAT1P24752 427 aaKnown RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 NPTX2P47972 431 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 OTUD4Q01804 1114 aaKnown RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 ARHGAP15Q53QZ3 475 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 FAM131BQ86XD5 332 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 AHI1Q8N157 1196 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 CAMKK1Q8N5S9 505 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 EDEM1Q92611 657 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 A0A087WZ62 844 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 PCDH8O95206 1070 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 EDRF1Q3B7T1 1238 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 GRAMD1AQ96CP6 724 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 TUBGCP3Q96CW5 907 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
SPG11-203ENST00000535302 FDXACB1Q9BRP7 624 aaPredicted RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 COPS7BQ9H9Q2 264 aaPredicted RBP13.04□□□□□ -0.32
SPG11-203ENST00000535302 CDH16O75309 829 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 DMPKQ09013 629 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 MAPK11Q15759 364 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 C11orf63Q6NUN7 778 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 DPF3Q92784 378 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 CELF6Q96J87 481 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 TMEM121Q9BTD3 319 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 TMA7Q9Y2S6 64 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 MORC2Q9Y6X9 1032 aaPredicted RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 GNG14A0A1W2PPG7 69 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 STX7O15400 261 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 GEMIN4P57678 1058 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 PAIP2BQ9ULR5 123 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 CXCL8P10145 99 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 YWHAQP27348 245 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 SERPINB9P50453 376 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 ATP6V0D2Q8N8Y2 350 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 PCYOX1LQ8NBM8 494 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 OSGEPQ9NPF4 335 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 CDC42BPAQ5VT25 1732 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 CDH2P19022 906 aaPredicted RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 SREBF2Q12772 1141 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 PLEKHH3Q7Z736 793 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 ERP44Q9BS26 406 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 FICDQ9BVA6 458 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 KLHL25Q9H0H3 589 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 TBC1D23Q9NUY8 699 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 TRMT6Q9UJA5 497 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 CNTNAP2Q9UHC6 1331 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 F5H5T6 163 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 LTFP02788 710 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 GTF2A2P52657 109 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 RAB14P61106 215 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 POM121L1PQ3SYA9 428 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 DDI1Q8WTU0 396 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 CLTCQ00610 1675 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 MOXD2PA6NHM9 499 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 EIF3HO15372 352 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■■□ 21.2
SPG11-203ENST00000535302 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 H2AFYO75367 372 aaKnown RBP13.03□□□□□ -0.32
SPG11-203ENST00000535302 FAM228BP0C875 321 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 RGS4P49798 205 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 MYL6P60660 151 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 PSMC6P62333 389 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 ANKS1AQ92625 1134 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 SEMA6BQ9H3T3 888 aa13.03□□□□□ -0.32
SPG11-203ENST00000535302 CPS1P31327 1500 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 IGF2BP3O00425 579 aaKnown RBP eCLIP13.02□□□□□ -0.32
SPG11-203ENST00000535302 TRAF2Q12933 501 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 YME1L1Q96TA2 773 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 MKNK1Q9BUB5 465 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 CIPCQ9C0C6 399 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 MTIF3Q9H2K0 278 aaKnown RBP13.02□□□□□ -0.32
SPG11-203ENST00000535302 RPS6KL1Q9Y6S9 549 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 ADGRB3O60242 1522 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 HSD17B3P37058 310 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 CAMK2GQ13555 558 aaPredicted RBP13.02□□□□□ -0.32
SPG11-203ENST00000535302 UGP2Q16851 508 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 TRIM65Q6PJ69 517 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 ARID3BQ8IVW6 561 aaPredicted RBP13.02□□□□□ -0.32
SPG11-203ENST00000535302 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.32
SPG11-203ENST00000535302 SLC12A8A0AV02 714 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 CFAP73A6NFT4 308 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 CBX4O00257 560 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 MYL4P12829 197 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 RGS2P41220 211 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 TRADDQ15628 312 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 TRAPPC11Q7Z392 1133 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 PMM1Q92871 262 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms