RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 PYM1Q9BRP8 204 aaKnown RBP11.47□□□□□ -0.57
VAMP1-204ENST00000535180 AGXT2Q9BYV1 514 aa11.47□□□□□ -0.57
VAMP1-204ENST00000535180 PCED1AQ9H1Q7 454 aa11.47□□□□□ -0.57
VAMP1-204ENST00000535180 STARD5Q9NSY2 213 aa11.47□□□□□ -0.57
VAMP1-204ENST00000535180 CFAP97Q9P2B7 532 aa11.47□□□□□ -0.57
VAMP1-204ENST00000535180 CPQQ9Y646 472 aa11.47□□□□□ -0.57
VAMP1-204ENST00000535180 ITPR3Q14573 2671 aa11.47□□□□□ -0.57
VAMP1-204ENST00000535180 TRIM24O15164 1050 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 HOXC11O43248 304 aaPredicted RBP11.46□□□□□ -0.57
VAMP1-204ENST00000535180 IGLV3-19P01714 112 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 ADRB2P07550 413 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 RPA1P27694 616 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 CTSKP43235 329 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 RIPPLY3P57055 190 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 EVCP57679 992 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 NFKB2Q00653 900 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 MCL1Q07820 350 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 ILKQ13418 452 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 LSMEM2Q8N112 164 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
VAMP1-204ENST00000535180 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 NUP58Q9BVL2 599 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 CCSER1Q9C0I3 900 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 MKRN2Q9H000 416 aaKnown RBP11.46□□□□□ -0.57
VAMP1-204ENST00000535180 KMT5AQ9NQR1 393 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 SMPD4Q9NXE4 827 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 HSPBP1Q9NZL4 362 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.57
VAMP1-204ENST00000535180 A0A1B0GTQ1 180 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 CLEC18AA5D8T8 446 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 WASH3PC4AMC7 463 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 LAD1O00515 517 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 DXOO77932 396 aaKnown RBP11.45□□□□□ -0.58
VAMP1-204ENST00000535180 GRIK1P39086 918 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 ERVPABLB-1P60509 514 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 STRN3Q13033 797 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 ORC1Q13415 861 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 FUT11Q495W5 492 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 CLEC18BQ6UXF7 455 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 ZPBP2Q6X784 338 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 DDX42Q86XP3 938 aaKnown RBP eCLIP11.45□□□□□ -0.58
VAMP1-204ENST00000535180 GATAD2AQ86YP4 633 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 CLEC18CQ8NCF0 446 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 SNX19Q92543 992 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 HAPLN2Q9GZV7 340 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 BHMT2Q9H2M3 363 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 TM9SF3Q9HD45 589 aa11.45□□□□□ -0.58
VAMP1-204ENST00000535180 TRAK2O60296 914 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 NEMFO60524 1076 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 PPP3CCP48454 512 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 TAF6P49848 677 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 PDIA5Q14554 519 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 ENOX2Q16206 610 aaKnown RBP11.44□□□□□ -0.58
VAMP1-204ENST00000535180 KYAT1Q16773 422 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 ANO4Q32M45 955 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 JADE1Q6IE81 842 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 XKR5Q6UX68 686 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 CD302Q8IX05 232 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 DAW1Q8N136 415 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 SCFD1Q8WVM8 642 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 ACBD6Q9BR61 282 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 NTPCRQ9BSD7 190 aaKnown RBP11.44□□□□□ -0.58
VAMP1-204ENST00000535180 SPHK2Q9NRA0 654 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 MAN2B2Q9Y2E5 1009 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.44□□□□□ -0.58
VAMP1-204ENST00000535180 CENPEQ02224 2701 aa11.44□□□□□ -0.58
VAMP1-204ENST00000535180 ZNF840PA6NDX5 716 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 PRRT4C9JH25 899 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 CPLX1O14810 134 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 SLC16A4O15374 487 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 OAS1P00973 400 aaKnown RBP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 ITGB6P18564 788 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 MUTP22033 750 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 MATR3P43243 847 aaKnown RBP eCLIP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 ZNF132P52740 706 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 INSM1Q01101 510 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 STARD3Q14849 445 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 LAYNQ6UX15 382 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 KDM7AQ6ZMT4 941 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 TMEM25Q86YD3 366 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 TMPRSS6Q8IU80 811 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 EID2Q8N6I1 236 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 ERMNQ8TAM6 284 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 SAP25Q8TEE9 199 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 SIPA1Q96FS4 1042 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 FUBP3Q96I24 572 aaKnown RBP eCLIP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 PKMYT1Q99640 499 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 C6orf106Q9H6K1 298 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 C17orf75Q9HAS0 396 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 DNAJC17Q9NVM6 304 aaKnown RBP11.43□□□□□ -0.58
VAMP1-204ENST00000535180 ADAMTS1Q9UHI8 967 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 GTF3C4Q9UKN8 822 aa11.43□□□□□ -0.58
VAMP1-204ENST00000535180 KPNA7A9QM74 516 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 FAM189A1O60320 539 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms