RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ZC3H12CQ9C0D7 883 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 NYXQ9GZU5 481 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 LHX5Q9H2C1 402 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 GSX1Q9H4S2 264 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 AZI2Q9H6S1 392 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 RC3H2Q9HBD1 1191 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 NCOA5Q9HCD5 579 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CD209Q9NNX6 404 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 IL1RAPL2Q9NP60 686 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ARHGEF3Q9NR81 526 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 FAM114A2Q9NRY5 505 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 TBC1D14Q9P2M4 693 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CD300AQ9UGN4 299 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 DPP7Q9UHL4 492 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 GTF2IRD1Q9UHL9 959 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 LNPEPQ9UIQ6 1025 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 SH3BGRL2Q9UJC5 107 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ZNF112Q9UJU3 913 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 MTMR6Q9Y217 621 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 INVSQ9Y283 1065 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 COQ6Q9Y2Z9 468 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 DMRT1Q9Y5R6 373 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 KLF2Q9Y5W3 355 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CSNK1G3Q9Y6M4 447 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PLA2R1Q13018 1463 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 E9PCH4 1651 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 MROH7-TTC4A0A0A0MT08 1334 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 MAP3K15Q6ZN16 1313 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ABCC12Q96J65 1359 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 JCADQ9P266 1359 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 SMARCA4P51532 1647 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CARMIL2Q6F5E8 1435 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 AQRO60306 1485 aaKnown RBP eCLIP5.41□□□□□ -1.548e-30■■■■■ 45.3
SNHG1-201ENST00000535076 CCDC141Q6ZP82 1450 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TYW5A2RUC4 315 aaKnown RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CTAGE15A4D2H0 777 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 FAM172BPA6NC97 362 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TRPC5OSA6NMA1 111 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 WDR64B1ANS9 1081 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 H0Y858 1186 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 FOXP2O15409 715 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TRAPPC3O43617 180 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PFKFB2O60825 505 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 AOC2O75106 756 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 ATP5HO75947 161 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 ALDH1A2O94788 518 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CNOT4O95628 575 aaKnown RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 GNAI2P04899 355 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CYP11A1P05108 521 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CTAGE8P0CG41 777 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TMEM11P17152 192 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 ITGB6P18564 788 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 KCNA3P22001 575 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TNFRSF8P28908 595 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PRCPP42785 496 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PTPN9P43378 593 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 SULT1E1P49888 294 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 SEPHS1P49903 392 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 FXR1P51114 621 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 ZNF135P52742 658 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 AP2S1P53680 142 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 MYL6P60660 151 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 HAND2P61296 217 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PSMC5P62195 406 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 EEF1A1P68104 462 aaKnown RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 NKX3-2P78367 333 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CYP4F8P98187 520 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 EXOSC10Q01780 885 aaKnown RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 EEF1A2Q05639 463 aaKnown RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 RALGDSQ12967 914 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 COASYQ13057 564 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PKP1Q13835 747 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 GIT2Q14161 759 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 ERV3-1Q14264 604 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 KCNAB1Q14722 419 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TGFBIQ15582 683 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 LSM12Q3MHD2 195 aaKnown RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 ZC2HC1CQ53FD0 456 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PLEKHG4Q58EX7 1191 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TTMPQ5BVD1 217 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 RPS26P11Q5JNZ5 115 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 HECTD3Q5T447 861 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 EEF1A1P5Q5VTE0 462 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 OLFML2BQ68BL8 750 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PDPK2PQ6A1A2 396 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 C15orf52Q6ZUT6 534 aaKnown RBP5.41□□□□□ -1.54
SNHG1-201ENST00000535076 USP43Q70EL4 1123 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 FRA10AC1Q70Z53 315 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CTAGE6Q86UF2 777 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 PDZD3Q86UT5 571 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CTAGE4Q8IX94 777 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 COLGALT2Q8IYK4 626 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 TCP11L2Q8N4U5 519 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 FBXL6Q8N531 539 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 CSGALNACT2Q8N6G5 542 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 IPMKQ8NFU5 416 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 SHC3Q92529 594 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 RAPGEF5Q92565 580 aa5.41□□□□□ -1.54
SNHG1-201ENST00000535076 MSANTD3Q96H12 275 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms