RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 BEND5Q7L4P6 421 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 RASSF3Q86WH2 238 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 ZMIZ2Q8NF64 920 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 SLC2A14Q8TDB8 520 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 TAS1R2Q8TE23 839 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 COCHO43405 550 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 CYP17A1P05093 508 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 ADH5P11766 374 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 OPRD1P41143 372 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 GCLMP48507 274 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 SCARA3Q6AZY7 606 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 PM20D1Q6GTS8 502 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 CPXM2Q8N436 756 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 UBR7Q8N806 425 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 WHAMMQ8TF30 809 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 ZFYVE19Q96K21 471 aa10.96□□□□□ -0.65
CSDE1-217ENST00000534699 ZFRQ96KR1 1074 aaKnown RBP10.96□□□□□ -0.65
CSDE1-217ENST00000534699 APOBEC3GQ9HC16 384 aaKnown RBP10.96□□□□□ -0.65
CSDE1-217ENST00000534699 XPO1O14980 1071 aaKnown RBP10.96□□□□□ -0.66
CSDE1-217ENST00000534699 AXIN1O15169 862 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 HCRTO43612 131 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 C7P10643 843 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 BCAT1P54687 386 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 TNK2Q07912 1038 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 MORC3Q14149 939 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 GAB4Q2WGN9 574 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 PLD4Q96BZ4 506 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 CNOT6LQ96LI5 555 aaKnown RBP10.96□□□□□ -0.66
CSDE1-217ENST00000534699 SLC22A12Q96S37 553 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.66
CSDE1-217ENST00000534699 CFAP97Q9P2B7 532 aa10.96□□□□□ -0.66
CSDE1-217ENST00000534699 HBS1LQ9Y450 684 aaKnown RBP10.96□□□□□ -0.66
CSDE1-217ENST00000534699 EGFP01133 1207 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 HOXD12P35452 270 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CHKAP35790 457 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 RAP1GAPP47736 663 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 SOX9P48436 509 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 GCNT1Q02742 428 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 PNOCQ13519 176 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CUL2Q13617 745 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 RABEPKQ7Z6M1 372 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 AZIN2Q96A70 460 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CHFRQ96EP1 664 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 SPHK2Q9NRA0 654 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CISHQ9NSE2 258 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
CSDE1-217ENST00000534699 GMIPQ9P107 970 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 HESX1Q9UBX0 185 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 STRIP2Q9ULQ0 834 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CLDN5O00501 218 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 SART1O43290 800 aaKnown RBP10.95□□□□□ -0.66
CSDE1-217ENST00000534699 TLR5O60602 858 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 FNTBP49356 437 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 RAD23BP54727 409 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 SGO2Q562F6 1265 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 ANKRD40Q6AI12 368 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.95□□□□□ -0.66
CSDE1-217ENST00000534699 ETFBKMTQ8IXQ9 262 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 FAM217AQ8IXS0 508 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 SLC35C1Q96A29 364 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 NT5C1BQ96P26 610 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CYP2S1Q96SQ9 504 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 SMG9Q9H0W8 520 aaKnown RBP10.95□□□□□ -0.66
CSDE1-217ENST00000534699 FBXO10Q9UK96 956 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CNTN6Q9UQ52 1028 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 DAAM1Q9Y4D1 1078 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 CACNA1IQ9P0X4 2223 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 PIEZO1Q92508 2521 aa10.95□□□□□ -0.66
CSDE1-217ENST00000534699 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 TIMM44O43615 452 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CACNG3O60359 315 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 RNF40O75150 1001 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 RPP40O75818 363 aaKnown RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 FBXO21O94952 628 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CCDC192P0DO97 292 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CACNA2D1P54289 1103 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 MAP3K7CLP57077 242 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 UBE2HP62256 183 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 BST2Q10589 180 aaKnown RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 DMC1Q14565 340 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 USP39Q53GS9 565 aaKnown RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 SCARA5Q6ZMJ2 495 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 Q6ZNB5 142 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CEP68Q76N32 757 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 SLC4A11Q8NBS3 891 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 HSFY1Q96LI6 401 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 NACA2Q9H009 215 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CNGB3Q9NQW8 809 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 MAN1B1Q9UKM7 699 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 SLC27A6Q9Y2P4 619 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 GTPBP10A4D1E9 387 aaKnown RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CLSTN1O94985 981 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 TRIM49P0CI25 452 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 TRIM49CP0CI26 452 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CCDC130P13994 396 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 FMO5P49326 533 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 NNTQ13423 1086 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 ELF2Q15723 593 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms